Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H21
         (500 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1; ...    34   1.6  
UniRef50_A0J572 Cluster: Diguanylate cyclase; n=2; Shewanella|Re...    33   2.7  
UniRef50_A5E702 Cluster: Predicted protein; n=1; Lodderomyces el...    33   4.8  
UniRef50_UPI0000F1E6B8 Cluster: PREDICTED: hypothetical protein;...    32   8.3  
UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:...    32   8.3  
UniRef50_A2FHL8 Cluster: Leucine Rich Repeat family protein; n=1...    32   8.3  

>UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 699

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 193 HRNGNHIYHNHSNS*RIHGHKKYSNV 116
           H N NHI H+H+N    H H  +SNV
Sbjct: 355 HNNSNHISHSHNNHNHNHTHHNHSNV 380


>UniRef50_A0J572 Cluster: Diguanylate cyclase; n=2; Shewanella|Rep:
           Diguanylate cyclase - Shewanella woodyi ATCC 51908
          Length = 328

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 351 RYSDDHRPYTLHIEIPITEPDKAINGCSLVYTVRSVNEPN*Y 226
           RY  +  PY  ++ +PIT PD +I G   V   ++ N P+ Y
Sbjct: 103 RYQKEEMPYLSYLGLPITWPDGSIFGSLSVLDTQTTNYPDEY 144


>UniRef50_A5E702 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 155

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 402 SLCHKLPRSLFICHCQLRYSDDH 334
           SLC  LPR  F+CH  LRY+  H
Sbjct: 74  SLCCALPRFAFLCHAMLRYAIRH 96


>UniRef50_UPI0000F1E6B8 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 334

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 20/82 (24%), Positives = 41/82 (50%)
 Frame = -3

Query: 492 HVIFFYCNNVTQIDKHCYDINVETCC*FSCSLCHKLPRSLFICHCQLRYSDDHRPYTLHI 313
           H++    N + + ++  Y +++  CC  SC+   ++   +      +  ++DH P   H 
Sbjct: 83  HILLKTSNVLDREERAEYFLSLALCC-QSCASAERIVAEVASVKVDVLDTNDHEPTFQHA 141

Query: 312 EIPITEPDKAINGCSLVYTVRS 247
           ++ IT  D A    S+VYTV++
Sbjct: 142 DVKIT-LDDATALRSVVYTVKA 162


>UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:
           Manirer-2 protein - Dugesia tigrina (Planarian)
          Length = 365

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = +1

Query: 229 SVRFIYGTNCINQRTTIYCFVRFRYGNFNVKSIRPVVVRIS*LTMTNK*RSWKLMTQTTT 408
           ++  +Y T  + Q T  + F RFR G+F++ +       I       K       +Q+  
Sbjct: 26  NINSVYPTQAVTQTTVAHWFKRFRSGDFDLSNQPRGRPEIKVDNDALKADVEADSSQSAL 85

Query: 409 ELAACLDVDIIAMFVYLRYIVTVKKNYMWV 498
           ELA+   V    + ++L+ I  VKK   WV
Sbjct: 86  ELASKFGVAKSTILIHLKQINKVKKLDKWV 115


>UniRef50_A2FHL8 Cluster: Leucine Rich Repeat family protein; n=1;
           Trichomonas vaginalis G3|Rep: Leucine Rich Repeat family
           protein - Trichomonas vaginalis G3
          Length = 859

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = -3

Query: 483 FFYCNNVTQIDKHCYDINVETCC*FSCSLCHKLPRSLFICHCQLRYSDDHRPYTLHIEIP 304
           FF C N+  I+  C  +  E  C   C L   +  S       L +++  R   L I++ 
Sbjct: 719 FFGCQNIDLINISCPTVQFEEKCFCGCGLKELICESTISKISYLSFANCDRLKILDIKLS 778

Query: 303 ---ITEPDKAINGCSLVYTV 253
              I  PD +   CS++ T+
Sbjct: 779 DDIIEIPDYSFTNCSMINTI 798


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,738,731
Number of Sequences: 1657284
Number of extensions: 9914670
Number of successful extensions: 20584
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20502
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)