Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H19
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical ... 79 2e-15
U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical pr... 74 9e-14
AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical ... 69 3e-12
AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical ... 50 2e-06
U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81132-5|CAB03436.1| 345|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 29 1.8
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 3.2
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 28 4.2
Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical p... 27 7.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 7.4
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 7.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 7.4
Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81047-13|CAB60284.1| 368|Caenorhabditis elegans Hypothetical p... 27 9.7
U41547-7|AAP40538.1| 58|Caenorhabditis elegans Hypothetical pr... 27 9.7
U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 9.7
>AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.3 protein.
Length = 139
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/119 (37%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +1
Query: 196 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTL-NGQSPDAPDAYPNC 360
CL CIC SGCK C D +CG + I PY+ D G+PT +G++ +A A+ C
Sbjct: 20 CLHCICMRESGCKP-IGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEA--AWKRC 76
Query: 361 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLVGYGCKGDLPFNYVNIFNQC 537
AND CA T V+NY N++ C G G C H GCK Y N C
Sbjct: 77 ANDLSCATTCVENYYNRYKSQCAGTGQGACEVMARNHNGGPQGCKHSGTLGYWNGIKSC 135
>U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical
protein F22A3.6a protein.
Length = 139
Score = 73.7 bits (173), Expect = 9e-14
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Frame = +1
Query: 178 APVTEVCLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTLN-GQSPDAP 342
A V+ CL CIC SGCK C D +CG + I Y+ D G+PT G++ +A
Sbjct: 14 AYVSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEA- 71
Query: 343 DAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLVGYGCKGDLPFNYVN 522
A+ CA+D CA T V+NY N++ CNG G+ C H GC Y N
Sbjct: 72 -AWKRCADDLNCATTCVENYYNRYKSQCNGLGMGACQIMSRNHNGGPRGCHNANTLAYWN 130
Query: 523 IFNQC 537
C
Sbjct: 131 GVKSC 135
>AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.2 protein.
Length = 139
Score = 68.5 bits (160), Expect = 3e-12
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +1
Query: 196 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKP-TLNGQSPDAPDAYPNC 360
CL CIC SGCK C D +CG + I PY+ D G+P +G+S + A+ C
Sbjct: 20 CLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIPYYEDCGQPGKKHGESTEV--AWKRC 76
Query: 361 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLVGYGCKGDLPFNYVNIFNQC 537
A+D CA V+NY N++ +C G G C H GC Y + C
Sbjct: 77 ADDLKCATNCVENYYNRYKHECAGTGQGACEVMARNHNGGPRGCHASGTLGYWKGVHSC 135
>AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical
protein C45G7.1 protein.
Length = 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 265 GLFHITWPYWADAGKP-TLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGV 441
G F I PY+ D G+P G+S ++ A+ CA+D CA T + NY +++ CNG G+
Sbjct: 28 GNFVIKLPYYIDCGEPGKQRGESTES--AWKRCADDLDCAETCMMNYYHRYKSQCNGLGM 85
Query: 442 VNC 450
C
Sbjct: 86 SEC 88
>U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical
protein C55F2.2 protein.
Length = 159
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = +1
Query: 121 ILIVGVCLADVYDVPQVNQAPVTEVCLGCICQAVSGCKQGTKCEGD-----ACGLFHITW 285
+ ++ + ++ + + ++ CL +C SGC C D CG F +
Sbjct: 6 VTVISLLVSVTHQLLMFDKVEDDHPCLLAMCDQDSGCVP-LGCSVDQFDRIGCGYFRLNI 64
Query: 286 PYWADAGKPTLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMA 465
+ +P + + +A+ NCA D C+A+ ++ KF C G C
Sbjct: 65 YQFQQCYQPGKKDEDTEN-EAWMNCAQDYQCSASCIRTLATKFRVKCYGKS--ECETIAR 121
Query: 466 IHKLVGYGCK 495
IH GC+
Sbjct: 122 IHDGGANGCR 131
>Z81132-5|CAB03436.1| 345|Caenorhabditis elegans Hypothetical
protein T26E4.7 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 314 VGLPAS-AQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPR 198
VG PAS Q G W P A P+ L C ++ W PR
Sbjct: 270 VGAPASPVQMGRSQWYNPLAGPTDLEKCGPHNSTWSYDPR 309
>Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/36 (33%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 YYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADVY 156
+ FI+NI +I+ ++ ++I +L++GVC+A++Y
Sbjct: 21 FSFIINIVHLLILTRKYMRTASIYVLLIGVCIAELY 56
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 323 PFN-VGLPASAQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPRHTSVTG 180
PF V LP SA +G + +KP A P H P +A++ P +S++G
Sbjct: 542 PFTPVELPNSADFGPLTASKPHAVPFH--PSEMCLSAFRKVPESSSISG 588
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 343 DAYPNCAND-PYCAATAVQNYMNKFGQ 420
DA P+CAND C A +Q ++N + Q
Sbjct: 161 DAVPDCANDRSICNAVGLQTFVNTYCQ 187
>Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical
protein T10H4.6 protein.
Length = 386
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 25 TPFFISIFNYYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADV 153
T F+ F + +NI +++ ++ AI IL++G+CLAD+
Sbjct: 37 TNVFMQFFTVF--INILHLIVLFQKELRTGAIYILMIGICLADI 78
>Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical
protein F26D2.13 protein.
Length = 247
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 343 DAYPNCANDP-YCAATAVQNYMNK 411
DA +CANDP C +QN++N+
Sbjct: 157 DAVTDCANDPSICNMVGMQNFVNQ 180
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 407 TNSDRIATVTALSTATITWPSTS*SDTGAKATFPSTT*IFSTNAWPWSPLTVVT 568
T ++ T ++ +T T P+T S T +T STT +T + P SP T T
Sbjct: 524 TTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTT-TKTTTSTPTSPQTTTT 576
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 407 TNSDRIATVTALSTATITWPSTS*SDTGAKATFPSTT*IFSTNAWPWSPLTVVT 568
T ++ T ++ +T T P+T S T +T STT +T + P SP T T
Sbjct: 365 TTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTT-TKTTTSTPTSPQTTTT 417
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 407 TNSDRIATVTALSTATITWPSTS*SDTGAKATFPSTT*IFSTNAWPWSPLTVVT 568
T ++ T ++ +T T P+T S T +T STT +T + P SP T T
Sbjct: 405 TTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTT-TKTTTSTPTSPQTTTT 457
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 422 IATVTALSTATITWPSTS*SDTGAKATFPSTT*IFSTNAWPWSPLT 559
++T+T S T T ST S+ + +T PSTT +T P SP T
Sbjct: 273 MSTITLTSDRTSTITSTGSSNPPSTSTVPSTT-TSTTTPKPSSPST 317
>Z92806-2|CAB07257.1| 303|Caenorhabditis elegans Hypothetical
protein K10G4.2 protein.
Length = 303
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 570 LVTTVSGDHGHALVENIYVVEGKV-AFAPVSD*LVDGHVIVA 448
L T +SG G+AL+E + +EG + F P D LV ++V+
Sbjct: 140 LATELSGKLGNALIEKMLHIEGVLFKFIPSIDLLVATLILVS 181
>Z81047-13|CAB60284.1| 368|Caenorhabditis elegans Hypothetical
protein C41G6.15 protein.
Length = 368
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/32 (28%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +1
Query: 61 ILNIF*SVIMASAVIKFSAI-ILIVGVCLADV 153
I+N+F +++ ++ S++ IL++G+C++D+
Sbjct: 46 IVNLFHLIVLFQKELRSSSVYILMIGICISDI 77
>U41547-7|AAP40538.1| 58|Caenorhabditis elegans Hypothetical
protein F22A3.6b protein.
Length = 58
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 178 APVTEVCLGCICQAVSGCKQGTKCEGD----ACGLFHI 279
A V+ CL CIC SGCK C D +CG + +
Sbjct: 14 AYVSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQV 50
>U13071-1|AAL65794.1| 462|Caenorhabditis elegans Hypothetical
protein T22F7.5 protein.
Length = 462
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 172 NQAPVTEVCLGCICQAVSGCKQGTKCEGDACGLFHITWPY 291
N A + + +G C A C GT C C H + PY
Sbjct: 248 NSACLDKSAIGAACTADEQCPNGTVCTLMMCKCAHGSSPY 287
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 398 IT*TNSDRIATVTALSTATITWPSTS*SDTGAKATFPSTT*IFSTN 535
+T T S +T T +T+T STS T ++T STT ST+
Sbjct: 180 VTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTS 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,559,510
Number of Sequences: 27780
Number of extensions: 290450
Number of successful extensions: 846
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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