Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H18
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    26   0.27 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.63 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           24   0.83 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -3

Query: 334 NGLSGRR*EIMVEPRSSVMTAELSPTPISKRRHQMTRRSPR*PGNSS 194
           NGLSG + +I+    +++ + E+ P P+     Q T+ +   P  +S
Sbjct: 369 NGLSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQAS 415


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 14/55 (25%), Positives = 21/55 (38%)
 Frame = +1

Query: 283 QKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPIS 447
           Q  W        +PT + Q + SP     TY   A      E P+  +   +P+S
Sbjct: 175 QVQWSATPQAGSTPTYQTQGLLSPSYGGTTYSFTADFRPPQETPVLASYKSVPMS 229



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 420 PKYGSYTYQYSCRSEPYPGIFAARSTRTMYVSSSS*RGR 536
           P YG  TY ++    P        S +++ +S SS R R
Sbjct: 198 PSYGGTTYSFTADFRPPQETPVLASYKSVPMSFSSPRRR 236


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYES 363
           S S+ PS   T    LS N +P   Y Y   PYE+
Sbjct: 128 STSSIPSPSTT--DDLSTNPTPPPHYTYQIIPYEA 160


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 412 PIHQNMAPIPISIPAGASLTPVS 480
           P+H +M P  + +  G SLTP++
Sbjct: 366 PMHHDMLPETMHMGMGPSLTPLA 388


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 412 PIHQNMAPIPISIPAGASLTPVS 480
           P+H +M P  + +  G SLTP++
Sbjct: 366 PMHHDMLPETMHMGMGPSLTPLA 388


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 259 SDSAPPSSQKTWVQPLSPNVSPT 327
           SD  PP+++    QP+   +SPT
Sbjct: 222 SDKNPPNTENNCAQPVVVIMSPT 244


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 389 RNTLSPKFRSTKIWLLY 439
           R TLSP F S+KI  +Y
Sbjct: 88  RATLSPAFTSSKIKNMY 104


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = -1

Query: 576 SYVRTSTALLL*FFCLFRSYWTHTWYELNVLQRY 475
           +Y++   ++L+ F   F ++WT  +   +  Q++
Sbjct: 52  TYIKLVVSVLMDFIAYFFNFWTILFSRSDFFQQF 85


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 375 STASTAILSARSSDPPKYGSYTYQYSCRSEP 467
           ST S+      S+  P Y S +   SC S P
Sbjct: 79  STPSSLPTQRTSTSNPTYSSRSVMTSCSSVP 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,933
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)