Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H18
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 40 0.009
AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein. 40 0.009
AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-ty... 33 0.57
AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-ty... 33 0.57
AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-ty... 33 0.57
AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-ty... 33 0.57
AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-ty... 33 0.57
AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-ty... 33 0.57
AK093501-1|BAC04186.1| 522|Homo sapiens protein ( Homo sapiens ... 33 0.57
AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein. 33 0.57
EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemother... 32 1.7
D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein. 32 1.7
BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein. 32 1.7
BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14... 32 1.7
BC036096-1|AAH36096.1| 549|Homo sapiens zinc finger protein 18 ... 32 1.7
AY491053-1|AAS67595.1| 548|Homo sapiens heart development-speci... 32 1.7
AK092656-1|BAC03939.1| 549|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens ... 32 1.7
AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein. 32 1.7
AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing pr... 32 1.7
U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein. 30 5.3
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 30 5.3
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq... 30 5.3
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 30 5.3
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 30 5.3
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 30 5.3
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 30 5.3
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 30 5.3
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 30 5.3
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio... 30 5.3
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 30 5.3
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 30 5.3
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 30 5.3
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 30 5.3
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 30 5.3
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 30 5.3
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 30 5.3
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 30 5.3
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 30 5.3
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 30 5.3
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 30 5.3
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 30 5.3
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein. 30 5.3
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 30 5.3
BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein. 30 7.0
BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein. 30 7.0
BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein. 30 7.0
BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein. 30 7.0
BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for IM... 30 7.0
AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein. 30 7.0
AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens ... 30 7.0
AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens ... 30 7.0
Y14372-2|CAB51806.1| 674|Homo sapiens gamma adducin protein. 29 9.2
Y14372-1|CAB51805.1| 706|Homo sapiens gamma adducin protein. 29 9.2
U37122-1|AAB17126.1| 675|Homo sapiens adducin gamma subunit pro... 29 9.2
D67031-1|BAA23783.1| 674|Homo sapiens adducin-like protein prot... 29 9.2
BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol... 29 9.2
BC094780-1|AAH94780.1| 320|Homo sapiens VGLL3 protein protein. 29 9.2
BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol... 29 9.2
BC062559-1|AAH62559.1| 706|Homo sapiens adducin 3 (gamma) protein. 29 9.2
AL590628-2|CAH71740.1| 706|Homo sapiens adducin 3 (gamma) protein. 29 9.2
AL590628-1|CAH71739.1| 674|Homo sapiens adducin 3 (gamma) protein. 29 9.2
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 29 9.2
AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein pr... 29 9.2
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 29 9.2
AK223270-1|BAD96990.1| 667|Homo sapiens adducin 3 isoform a var... 29 9.2
AK128823-1|BAC87624.1| 135|Homo sapiens protein ( Homo sapiens ... 29 9.2
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 29 9.2
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 29 9.2
AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein. 29 9.2
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 29 9.2
AB209810-1|BAD93047.1| 698|Homo sapiens adducin 3 isoform a var... 29 9.2
AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein. 29 9.2
AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein. 29 9.2
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 29 9.2
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 39.5 bits (88), Expect = 0.009
Identities = 32/105 (30%), Positives = 47/105 (44%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMA 432
W P S +T P + NVSP + ++H ++ +PQ+SQ VP ++ MA
Sbjct: 865 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 917
Query: 433 PIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
P+ + G+ L PVS Q P P + L S AGP
Sbjct: 918 PMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTAPQQGLPGLSPAGP 962
>AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein.
Length = 893
Score = 39.5 bits (88), Expect = 0.009
Identities = 32/105 (30%), Positives = 47/105 (44%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMA 432
W P S +T P + NVSP + ++H ++ +PQ+SQ VP ++ MA
Sbjct: 716 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 768
Query: 433 PIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
P+ + G+ L PVS Q P P + L S AGP
Sbjct: 769 PMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTAPQQGLPGLSPAGP 813
>AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 661 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 715
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 716 ESYYPVAPHPTQ 727
>AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 661 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 715
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 716 ESYYPVAPHPTQ 727
>AK093501-1|BAC04186.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ36182 fis, clone TESTI2026824, weakly similar to
Homo sapiens membrane-associated nucleic acid binding
protein ).
Length = 522
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 50 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 104
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 105 ESYYPVAPHPTQ 116
>AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein.
Length = 1109
Score = 33.5 bits (73), Expect = 0.57
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 331 RYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 501
+Y +Y S Y+ + Y AP Y++ E+ +PIPI IP A S P S + Q +
Sbjct: 637 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 691
Query: 502 PCMCPVAPEEAE 537
PVAP +
Sbjct: 692 ESYYPVAPHPTQ 703
>EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemotherapy
resistance-associated protein 1 variant 2 protein.
Length = 235
Score = 31.9 bits (69), Expect = 1.7
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 87 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 146
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 147 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 177
>D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein.
Length = 291
Score = 31.9 bits (69), Expect = 1.7
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 143 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 202
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 203 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 233
>BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein.
Length = 235
Score = 31.9 bits (69), Expect = 1.7
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Frame = +1
Query: 226 ASSDAFFLKWGSD-SAPPSSQKTWVQPLSPNVSP------TIRYQYMYSPYESHKTYQLQ 384
ASS AF G+ PP+ T P SP+ +P IR Y + Y Q
Sbjct: 87 ASSAAFRYTAGTPYKVPPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQ 146
Query: 385 APQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
+QP V IH P SIP+ PV+
Sbjct: 147 PVYAAQPHV-IHHTTVVQPNSIPSAIYPAPVA 177
>BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14
protein.
Length = 571
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
>BC036096-1|AAH36096.1| 549|Homo sapiens zinc finger protein 18
protein.
Length = 549
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 331 RYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSLQHVQLVPCM 510
RYQ M P+E+ K + Q+ QPEV + + I + + ++ P +Q V
Sbjct: 48 RYQVMSGPHETLKQLRKLCFQWLQPEVHTKEQILEI-LMLEQFLTILPGEIQ--MWVRKQ 104
Query: 511 CPVAPEEAEKLQEQSGAGP 567
CP + EEA L E P
Sbjct: 105 CPGSGEEAVTLVESLKGDP 123
>AY491053-1|AAS67595.1| 548|Homo sapiens heart development-specific
protein protein.
Length = 548
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 331 RYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSLQHVQLVPCM 510
RYQ M P+E+ K + Q+ QPEV + + I + + ++ P +Q V
Sbjct: 48 RYQVMSGPHETLKQLRKLCFQWLQPEVHTKEQILEI-LMLEQFLTILPGEIQ--MWVRKQ 104
Query: 511 CPVAPEEAEKLQEQSGAGP 567
CP + EEA L E P
Sbjct: 105 CPGSGEEAVTLVESLKGDP 123
>AK092656-1|BAC03939.1| 549|Homo sapiens protein ( Homo sapiens
cDNA FLJ35337 fis, clone PROST2015537, moderately
similar to ZINC FINGER PROTEIN 38. ).
Length = 549
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 331 RYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSLQHVQLVPCM 510
RYQ M P+E+ K + Q+ QPEV + + I + + ++ P +Q V
Sbjct: 48 RYQVMSGPHETLKQLRKLCFQWLQPEVHTKEQILEI-LMLEQFLTILPGEIQ--MWVRKQ 104
Query: 511 CPVAPEEAEKLQEQSGAGP 567
CP + EEA L E P
Sbjct: 105 CPGSGEEAVTLVESLKGDP 123
>AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ12533 fis, clone NT2RM4000202, weakly similar to
ZINC FINGER PROTEIN MOK-2. ).
Length = 571
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
>AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein.
Length = 362
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 346 YSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVSLQH 489
+SPY+SH + S P VP+H ++ P P LT + L H
Sbjct: 66 WSPYKSHPCVTTNSSNNSCPAVPVHFTISTPPSIPPHWQGLTALVLLH 113
>AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing
protein 14 protein.
Length = 571
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
>U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein.
Length = 652
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 440 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 499
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 500 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 533
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 1912 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1971
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1972 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 2005
>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
sequence from clone RP4-669P10 on chromosome
22q13.31-13.33. ).
Length = 1960
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 341 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 375
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 575
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 575
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
factor 20 (AR1, KIAA0292)) protein.
Length = 1641
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 97 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 131
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA1 protein.
Length = 1999
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 185 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 243
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 244 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 289
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 113 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 171
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 172 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 217
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 575
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 183
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 184 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 229
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 1811 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1870
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1871 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1904
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 2000 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 2059
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 2060 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 2093
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 1811 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1870
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1871 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1904
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 183
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 184 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 229
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 30.3 bits (65), Expect = 5.3
Identities = 22/94 (23%), Positives = 36/94 (38%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISI 450
PPS Q P+ +PT+ + QAP Y +
Sbjct: 1815 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1874
Query: 451 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 552
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1875 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1908
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
Length = 1716
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 6/35 (17%)
Frame = +1
Query: 376 QLQAPQYSQPEVPI------HQNMAPIPISIPAGA 462
Q Q QY+QPEVP+ HQN +PI PA +
Sbjct: 97 QSQVGQYNQPEVPVRSPMQFHQNFSPISNPSPAAS 131
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 30.3 bits (65), Expect = 5.3
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +1
Query: 253 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-QPEVPIHQNM 429
+ S P Q+ P+ +P + Y P Q P YS QP P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ 579
+P P P+ S T QH Q P P A ++ Q Q A ++Q
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQ 192
>BC110818-1|AAI10819.1| 646|Homo sapiens CHD7 protein protein.
Length = 646
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 502 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 561
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 562 FLEKPVPDMTQVSGPNAQLV 581
>BC080627-1|AAH80627.1| 628|Homo sapiens CHD7 protein protein.
Length = 628
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 526 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 585
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 586 FLEKPVPDMTQVSGPNAQLV 605
>BC068000-1|AAH68000.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>BC053890-1|AAH53890.1| 594|Homo sapiens CHD7 protein protein.
Length = 594
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>BC014681-1|AAH14681.1| 637|Homo sapiens Unknown (protein for
IMAGE:3866722) protein.
Length = 637
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 496 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 555
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 556 FLEKPVPDMTQVSGPNAQLV 575
>AY515706-1|AAR99656.1| 668|Homo sapiens bestrophin 3 protein.
Length = 668
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQY--MYSPYESHKTYQLQA--PQYSQPEVPIHQNMAPI 438
PP + TW + P SPT+ + + + E+ +T LQ+ PQ S PI + P
Sbjct: 443 PPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVP- 501
Query: 439 PISIPAGASLTPVS 480
+ I A + P S
Sbjct: 502 EVLITAAEAPVPTS 515
>AK123158-1|BAC85544.1| 572|Homo sapiens protein ( Homo sapiens
cDNA FLJ41163 fis, clone BRACE2039734. ).
Length = 572
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 274 PSSQKTWVQ-PLSPNVSPTIRYQYMYSPYESHKTYQLQ---APQYSQPEVPIHQNMAPIP 441
P Q ++ Q P P + P + SP H Q +PQ + +VP+HQ+ P
Sbjct: 258 PGQQPSFQQLPTCPPLQPHPGLHHQSSPPHPHHQPWAQLHPSPQNTPQKVPVHQHSPSEP 317
Query: 442 ISIPAGASLTPVSLQHVQLV 501
+T VS + QLV
Sbjct: 318 FLEKPVPDMTQVSGPNAQLV 337
>AK096459-1|BAC04797.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ39140 fis, clone NTONG2009233, moderately
similar to BESTROPHIN. ).
Length = 668
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQY--MYSPYESHKTYQLQA--PQYSQPEVPIHQNMAPI 438
PP + TW + P SPT+ + + + E+ +T LQ+ PQ S PI + P
Sbjct: 443 PPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVP- 501
Query: 439 PISIPAGASLTPVS 480
+ I A + P S
Sbjct: 502 EVLITAAEAPVPTS 515
>Y14372-2|CAB51806.1| 674|Homo sapiens gamma adducin protein.
Length = 674
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>Y14372-1|CAB51805.1| 706|Homo sapiens gamma adducin protein.
Length = 706
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>U37122-1|AAB17126.1| 675|Homo sapiens adducin gamma subunit
protein.
Length = 675
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>D67031-1|BAA23783.1| 674|Homo sapiens adducin-like protein
protein.
Length = 674
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 29.5 bits (63), Expect = 9.2
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 SSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPA 456
SS P+ P++ + + + K QL Q + E+ + Q A + +S+
Sbjct: 181 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 240
Query: 457 G---ASLTPVSLQ---HVQLVPCMCPVAPEEAEKLQEQSGAGP 567
++L P S HV +P M AP + E+S GP
Sbjct: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGP 283
>BC094780-1|AAH94780.1| 320|Homo sapiens VGLL3 protein protein.
Length = 320
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 271 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESH 366
PP+ ++W PL+ VSP+ Y +M+ Y H
Sbjct: 200 PPAVSESWPYPLTSQVSPS--YSHMHDVYMRH 229
>BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 29.5 bits (63), Expect = 9.2
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 SSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPA 456
SS P+ P++ + + + K QL Q + E+ + Q A + +S+
Sbjct: 181 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 240
Query: 457 G---ASLTPVSLQ---HVQLVPCMCPVAPEEAEKLQEQSGAGP 567
++L P S HV +P M AP + E+S GP
Sbjct: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGP 283
>BC062559-1|AAH62559.1| 706|Homo sapiens adducin 3 (gamma) protein.
Length = 706
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AL590628-2|CAH71740.1| 706|Homo sapiens adducin 3 (gamma) protein.
Length = 706
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AL590628-1|CAH71739.1| 674|Homo sapiens adducin 3 (gamma) protein.
Length = 674
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 130 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 177
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 301 PLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
P P+++ +IR + ++SP + Q++ + P P P +PA AS P
Sbjct: 3103 PTLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTP-----QPAPAGVPALASQHPPE 3157
Query: 481 LQHVQLVPCMCPVAPEEAEKLQEQS 555
+ +P AP ++E L QS
Sbjct: 3158 EEVHYHLPVARATAPVQSEVLVMQS 3182
>AL096858-1|CAB51072.1| 3261|Homo sapiens hypothetical protein
protein.
Length = 3261
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 301 PLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
P P+++ +IR + ++SP + Q++ + P P P +PA AS P
Sbjct: 2700 PTLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTP-----QPAPAGVPALASQHPPE 2754
Query: 481 LQHVQLVPCMCPVAPEEAEKLQEQS 555
+ +P AP ++E L QS
Sbjct: 2755 EEVHYHLPVARATAPVQSEVLVMQS 2779
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 301 PLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
P P+++ +IR + ++SP + Q++ + P P P +PA AS P
Sbjct: 3103 PTLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTP-----QPAPAGVPALASQHPPE 3157
Query: 481 LQHVQLVPCMCPVAPEEAEKLQEQS 555
+ +P AP ++E L QS
Sbjct: 3158 EEVHYHLPVARATAPVQSEVLVMQS 3182
>AK223270-1|BAD96990.1| 667|Homo sapiens adducin 3 isoform a
variant protein.
Length = 667
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 91 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 138
>AK128823-1|BAC87624.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46121 fis, clone TESTI2039342. ).
Length = 135
Score = 29.5 bits (63), Expect = 9.2
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQ-PEVPIHQNMAP 435
S APPS +KT P P+ SP++ + + + + + AP S P+ +
Sbjct: 32 SRPAPPSPRKTSPGPPQPSASPSLPFSPLLA--GCSRLLPVLAPSLSSVHRCPLGARASR 89
Query: 436 IPISIPAGASLT---PVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
+P + AG S + P+ L Q C+ E+ L + GP
Sbjct: 90 LPWKLEAGTSSSGDRPLCLHSGQRGACL---TDEQGSTLSPRQRRGP 133
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 29.5 bits (63), Expect = 9.2
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAP--QYSQPEVP--IHQN 426
+ + PP++ P +P + S TY L AP Q P+ P +
Sbjct: 1124 TSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAA 1183
Query: 427 MAPIPI-SIPAGAS--LTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYS 588
+A IP+ S AGAS P Q ++ P P APE + Q A P + +T++
Sbjct: 1184 IASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT 1240
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 301 PLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
P P+++ +IR + ++SP + Q++ + P P P +PA AS P
Sbjct: 3103 PTLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTP-----QPAPAGVPALASQHPPE 3157
Query: 481 LQHVQLVPCMCPVAPEEAEKLQEQS 555
+ +P AP ++E L QS
Sbjct: 3158 EEVHYHLPVARATAPVQSEVLVMQS 3182
>AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein.
Length = 725
Score = 29.5 bits (63), Expect = 9.2
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 SSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPA 456
SS P+ P++ + + + K QL Q + E+ + Q A + +S+
Sbjct: 181 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 240
Query: 457 G---ASLTPVSLQ---HVQLVPCMCPVAPEEAEKLQEQSGAGP 567
++L P S HV +P M AP + E+S GP
Sbjct: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGP 283
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 29.5 bits (63), Expect = 9.2
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAP--QYSQPEVP--IHQN 426
+ + PP++ P +P + S TY L AP Q P+ P +
Sbjct: 969 TSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAA 1028
Query: 427 MAPIPI-SIPAGAS--LTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYS 588
+A IP+ S AGAS P Q ++ P P APE + Q A P + +T++
Sbjct: 1029 IASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT 1085
>AB209810-1|BAD93047.1| 698|Homo sapiens adducin 3 isoform a
variant protein.
Length = 698
Score = 29.5 bits (63), Expect = 9.2
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 427 YFGGSELRAESIAVL--AVDMFCAIHMANTYIDNGLSGRR*EIMVEPR 290
Y G +L +A L VD+F H+ANTYI +S + I++ PR
Sbjct: 131 YVKGEKLTRCKLASLYRLVDLFGWAHLANTYISVRISKEQDHIIIIPR 178
>AB023146-1|BAA76773.1| 1663|Homo sapiens KIAA0929 protein protein.
Length = 1663
Score = 29.5 bits (63), Expect = 9.2
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 301 PLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPAGASLTPVS 480
P P+++ +IR + ++SP + Q++ + P P P +PA AS P
Sbjct: 1102 PTLPSITYSIRPEALHSPRAPLQPQQIEVRAPQRASTP-----QPAPAGVPALASQHPPE 1156
Query: 481 LQHVQLVPCMCPVAPEEAEKLQEQS 555
+ +P AP ++E L QS
Sbjct: 1157 EEVHYHLPVARATAPVQSEVLVMQS 1181
>AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.
Length = 1644
Score = 29.5 bits (63), Expect = 9.2
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = +1
Query: 277 SSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIPA 456
SS P+ P++ + + + K QL Q + E+ + Q A + +S+
Sbjct: 270 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 329
Query: 457 G---ASLTPVSLQ---HVQLVPCMCPVAPEEAEKLQEQSGAGP 567
++L P S HV +P M AP + E+S GP
Sbjct: 330 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGP 372
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 29.5 bits (63), Expect = 9.2
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +1
Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAP--QYSQPEVP--IHQN 426
+ + PP++ P +P + S TY L AP Q P+ P +
Sbjct: 967 TSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAA 1026
Query: 427 MAPIPI-SIPAGAS--LTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYS 588
+A IP+ S AGAS P Q ++ P P APE + Q A P + +T++
Sbjct: 1027 IASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT 1083
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,751,277
Number of Sequences: 237096
Number of extensions: 2068543
Number of successful extensions: 5232
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5218
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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