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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H18
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-10|CAA97336.2|  391|Caenorhabditis elegans Hypothetical p...    37   0.012
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    33   0.20 
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist...    33   0.20 
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele...    33   0.20 
U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U28941-4|AAM98024.1|  484|Caenorhabditis elegans Temporarily ass...    29   3.2  
U28941-3|AAM98025.1|  799|Caenorhabditis elegans Temporarily ass...    29   3.2  
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass...    29   3.2  
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass...    29   3.2  
AF125463-1|AAD12861.2|  263|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm rec...    28   4.3  
Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical p...    28   5.7  
AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine r...    28   5.7  
Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and cap...    27   7.5  
AC024839-3|AAF60829.1|  308|Caenorhabditis elegans T box family ...    27   7.5  
AC024839-2|AAF60830.1|  308|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical p...    27   9.9  
U97013-6|AAB52337.1|  221|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF106575-14|AAC78163.2|  365|Caenorhabditis elegans Serpentine r...    27   9.9  
AF067942-6|AAG45579.1|  345|Caenorhabditis elegans Hypothetical ...    27   9.9  

>Z73098-10|CAA97336.2|  391|Caenorhabditis elegans Hypothetical
           protein T21C9.9 protein.
          Length = 391

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
 Frame = +1

Query: 289 TWVQPLSPNVSP---TIRY-QYMYSPYES-HKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
           T+ + L+P   P   T  Y QY   P +S  + YQL  P+Y QP+ P  Q ++  P   P
Sbjct: 58  TFYRDLTPFRQPYYQTASYPQYQQGPAQSLQQMYQLPNPRYIQPQAPRPQYISR-PAPRP 116

Query: 454 AGASLTPVSLQHVQLVPCMCPVA--PEEAEKLQEQSGAGPYVAQT 582
           A A   P  +Q    V    PVA   E  +     +G G  + +T
Sbjct: 117 APAPYQPPRVQERPYVQPAAPVAELAETRKNTLHDNGYGEEIERT 161


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
            W01F3.3 protein.
          Length = 2175

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
 Frame = +1

Query: 268  APPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVP---IHQNMAPI 438
            AP +     VQP+ P V P    Q +  P E  +    Q+P   QP VP   I    AP 
Sbjct: 1472 APVAPVAQPVQPIQP-VQPVQSVQSLPQPAEIPRVVVPQSPGTPQPVVPQVSIVTPQAPQ 1530

Query: 439  PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
            P +    AS  P++ +     P      P
Sbjct: 1531 PTAAATSASTGPIAPEPTTAAPTTTETTP 1559


>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
            protein 1 protein.
          Length = 1852

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
 Frame = +1

Query: 259  SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 432
            S S  P+S      P+SP+ SPT       SP  S    +Y   +P YS P  P +   +
Sbjct: 1593 SPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTS 1651

Query: 433  P-----IPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQT 582
            P      P   P+  S +P S ++    P   P +P  +      S   P  + T
Sbjct: 1652 PSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPT 1706


>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
            RNA polymeraseII largest subunit (ama-1 IV) gene,
            complete cds. ).
          Length = 1859

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
 Frame = +1

Query: 259  SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 432
            S S  P+S      P+SP+ SPT       SP  S    +Y   +P YS P  P +   +
Sbjct: 1600 SPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS-PTSPSYSPTS 1658

Query: 433  P-----IPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQT 582
            P      P   P+  S +P S ++    P   P +P  +      S   P  + T
Sbjct: 1659 PSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPT 1713


>U40954-8|AAM69083.2|  471|Caenorhabditis elegans Hypothetical
           protein ZK813.5 protein.
          Length = 471

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
 Frame = +1

Query: 259 SDSAPPSSQKTWV-----QPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQ 423
           SD +P SS  T V       +    SP+ + +  ++P  S  +Y+   P     E  +  
Sbjct: 345 SDVSPASSVMTVVGGENGPRIKSEASPSYQLRPNWNPSPSVTSYESDPPSSVTQETNLPI 404

Query: 424 NMAPIPISIPAGASLTP 474
              P P+S+PA A+ TP
Sbjct: 405 TSIP-PVSVPASANCTP 420


>U97009-3|AAC69031.1|  619|Caenorhabditis elegans Hypothetical
           protein T19H12.6 protein.
          Length = 619

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
 Frame = +1

Query: 193 MMSFLVILAIVASSDAFFLKWGSDSAPPS--SQKTW----VQPLSPNVSP-TIRYQYMYS 351
           ++ F+VILA+V    AFFL     S+  S  S +T+    +Q +SP+ SP T R ++  S
Sbjct: 104 LVQFIVILALVLGLIAFFLTRSESSSTTSEYSTRTYQNFELQTISPSSSPLTFRRRFKTS 163


>Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical
           protein W02A2.7 protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
 Frame = +1

Query: 280 SQKTWVQPLSPNVS--PTI---RYQYMYS---PYESHKTYQLQ--APQYSQPEVPIHQNM 429
           S  T   PL P  S  P I   + QY ++   P +   TY  Q  + Q   P  P +Q+ 
Sbjct: 16  SPTTTQPPLPPGQSSHPQIYDQQMQYYFAAAMPNQPMATYAAQNGSSQQYAPAAPYYQDA 75

Query: 430 APIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSG 558
               + +PA  S+ P     V   P +    P++  +   QSG
Sbjct: 76  NGQYVQVPANGSMAPQQHMMVSGQPYLYMAQPQQGAQQVMQSG 118


>U28941-4|AAM98024.1|  484|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform c protein.
          Length = 484

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +1

Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
           D +P S   T  + + P+++P      + + +  P+      Q  A Q+  P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222

Query: 430 APIPIS 447
            P+PIS
Sbjct: 223 QPVPIS 228


>U28941-3|AAM98025.1|  799|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform d protein.
          Length = 799

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +1

Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
           D +P S   T  + + P+++P      + + +  P+      Q  A Q+  P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222

Query: 430 APIPIS 447
            P+PIS
Sbjct: 223 QPVPIS 228


>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform a protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +1

Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
           D +P S   T  + + P+++P      + + +  P+      Q  A Q+  P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222

Query: 430 APIPIS 447
            P+PIS
Sbjct: 223 QPVPIS 228


>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 149, isoform b protein.
          Length = 1107

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +1

Query: 262 DSAPPSSQKTWVQPLSPNVSP---TIRYQYMY-SPYESHKTYQLQAPQYSQPEVPIHQNM 429
           D +P S   T  + + P+++P      + + +  P+      Q  A Q+  P VP H+ +
Sbjct: 164 DLSPTSRDSTQFEQI-PSIAPEESAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQHKIV 222

Query: 430 APIPIS 447
            P+PIS
Sbjct: 223 QPVPIS 228


>AF125463-1|AAD12861.2|  263|Caenorhabditis elegans Hypothetical
           protein Y49F6C.6 protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 259 SDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQ---YSQPEVP 414
           ++S P S QKT  Q      +PT+  QY+YS     + Y    P+     QP+ P
Sbjct: 60  NNSKPISLQKTKTQFFLNYSNPTVLLQYLYSTTTVPRPYPTTNPKLISLQQPKTP 114


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
 Frame = +1

Query: 274 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 438
           PS   T   P S N +P I      Q        ++  Q   P Y+       Q MA  +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354

Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
           P+  P+GA+  PVS    Q+V     V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
 Frame = +1

Query: 274 PSSQKTWVQPLSPNVSPTIRY----QYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAP-I 438
           PS   T   P S N +P I      Q        ++  Q   P Y+       Q MA  +
Sbjct: 295 PSVPYTVTYPQSANSTPGIPQPLPQQMSRQQAPIYQNQQQMPPGYNPYLQQQQQQMAATV 354

Query: 439 PISIPAGASLTPVSLQHVQLVPCMCPVAP 525
           P+  P+GA+  PVS    Q+V     V P
Sbjct: 355 PMPYPSGAAAVPVSAMAPQVVQYPTTVVP 383


>AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm
           receptor protein 82 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 428 WLLYLSVFLPERALPRYLCSTFNSYHVCVQ*LLKRQKNYRSRAV 559
           +LLY + F+  + L + L  TF S   C+Q +L  Q  YR  +V
Sbjct: 73  YLLYTTQFVEYQLLSQILIVTFCSIFACMQVVLSTQFIYRYLSV 116


>Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical
           protein R07E5.3 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 361 SHKTYQLQAPQYSQPEVP-IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVA 522
           S + Y+      S P      + +A  P +  AG  +T  S  H++ VPC CP+A
Sbjct: 94  SEEKYRAAGAAPSTPRTEGASRTVAKTPATGWAGQQVTSGS-HHLESVPCSCPIA 147


>AF038608-10|AAC25814.2|  327|Caenorhabditis elegans Serpentine
           receptor, class z protein78 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 407 KFRSTKIWLLYLSVFLPERALPRYLCSTFNS 499
           K  +  IW LYL  F+ E AL    C+T ++
Sbjct: 152 KLMAKHIWYLYLVCFIKELALAIIFCTTIST 182


>Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical
           protein F35B12.3 protein.
          Length = 248

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 384 STAILSARSSDPPKYGSYTYQYSCRSEPYP 473
           S  IL+A      +YG+Y  QYS +S+ YP
Sbjct: 10  SCGILAAAYPYSQQYGNYDQQYSQQSQYYP 39


>AF047660-1|AAC04431.1|  900|Caenorhabditis elegans Osm-9 and
           capsaicin receptor-relatedprotein 2 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 415 IHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVAPEE 531
           IH+NMA   +++  GASL  V+ Q +  +     +A +E
Sbjct: 307 IHENMAMFKLALECGASLRTVNKQSLSPLTLAAKLAKKE 345


>AC024839-3|AAF60829.1|  308|Caenorhabditis elegans T box family
           protein 30 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 301 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 435
           P SP  S   +YQY    YSP++S   Y      YS    P  Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296


>AC024839-2|AAF60830.1|  308|Caenorhabditis elegans Hypothetical
           protein Y59E9AR.5 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 301 PLSPNVSPTIRYQY---MYSPYESHKTYQLQAPQYSQPEVPIHQNMAP 435
           P SP  S   +YQY    YSP++S   Y      YS    P  Q+ +P
Sbjct: 249 PSSPLYSSQNQYQYPFHPYSPFDSSIPYPYSPMDYSYYFNPTFQSFSP 296


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
 Frame = +1

Query: 190 RMMSFLVILAIVASSDAFFLKWGSDSAPPSSQKTWVQPLSPN----VSPTIRYQYMYSPY 357
           R++ F+V L  +  S  +  +       P  Q+T   P+  N     +   RY++   P 
Sbjct: 2   RLLLFIVALVPLVLSQYYMQQQMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPT 61

Query: 358 ESHKTYQLQ---APQYSQPEVPIHQNMAPIP-ISIPAGASLTPVS 480
                 Q+Q    P    P  P+     P+P +  P  ++L P++
Sbjct: 62  NIRPNVQVQIRTIPSAPGPIRPVVNPAPPLPTLPTPPPSTLPPIT 106


>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +1

Query: 397 SQPEVPIHQNMAPIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 567
           SQP  P     AP   S+P  A +   S   V   P    +A E    L   SG+GP
Sbjct: 192 SQPSPPAQMYQAP---SVPKSAPIPHSSSGRVSASPFAKKLAAENGLDLSGVSGSGP 245


>Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical
           protein C07A9.11 protein.
          Length = 672

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 361 SHKTYQLQAPQYSQPEVPIHQNMAPIP-ISIPAGA 462
           S K+    AP    PE+ +H   AP P IS+  GA
Sbjct: 269 SRKSIHSVAPMPVIPEIEVHDQEAPFPEISVVTGA 303


>U97013-6|AAB52337.1|  221|Caenorhabditis elegans Hypothetical
           protein F28H1.1 protein.
          Length = 221

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 337 QYMYSPYES--HKTYQLQAPQYSQPEVPIHQNMA 432
           QY  + Y++  H+ YQ   P Y QPE P+H   A
Sbjct: 92  QYQQNQYQARQHQYYQNPPPFY-QPEQPVHYQSA 124


>AF106575-14|AAC78163.2|  365|Caenorhabditis elegans Serpentine
           receptor, class w protein98 protein.
          Length = 365

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 193 MMSFLVILAIVASSDAFFLKWGSDSAPPSS 282
           +  F+ ++A + SS  FF + G+D  PP S
Sbjct: 79  LCDFVAMIATIVSSGMFFDEEGTDCTPPVS 108


>AF067942-6|AAG45579.1|  345|Caenorhabditis elegans Hypothetical
           protein ZK6.4 protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 256 GSDSAPPSSQKTWVQPLSPNVSPTIR 333
           GSD  PP+S +  +  +SPN+   IR
Sbjct: 205 GSDVLPPASSEWHISKISPNLENKIR 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,472,295
Number of Sequences: 27780
Number of extensions: 318376
Number of successful extensions: 972
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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