Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H18
(588 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 25 0.42
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 25 0.42
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 2.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 3.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 6.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 6.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 6.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 6.8
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 9.0
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 9.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.0
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 25.4 bits (53), Expect = 0.42
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 316 VSPTIRYQYMYSPYESHKTYQLQAPQYSQPE 408
+SP Y YSP SH Y + Q+S P+
Sbjct: 261 LSPVTNNLY-YSPLLSHGLYYVDTEQFSNPQ 290
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 25.4 bits (53), Expect = 0.42
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 223 VASSDAFFLKWGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQY 396
+ S +F + + P SQ T +Q L P VSP Y Y +PQY
Sbjct: 386 IGSGGSFPSLYPMATTSPQSQST-IQTLRPQVSPDRTSPMEYRLYNPALIQSQPSPQY 442
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 263 SDPHFKKKASDDATIAKIT 207
SDP F KKA D I K++
Sbjct: 211 SDPIFDKKAMSDLVICKLS 229
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 263 SDPHFKKKASDDATIAKIT 207
SDP F KKA D I K++
Sbjct: 211 SDPIFDKKAMSDLVICKLS 229
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 447 YSCRSEPYPGIF 482
Y C EPYP IF
Sbjct: 215 YPCCDEPYPDIF 226
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 447 YSCRSEPYPGI 479
YSC EPYP I
Sbjct: 193 YSCCPEPYPDI 203
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/48 (20%), Positives = 19/48 (39%)
Frame = +1
Query: 310 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
P + ++ Y YS Y ++ Y + + + IPI +P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/48 (20%), Positives = 19/48 (39%)
Frame = +1
Query: 310 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
P + ++ Y YS Y ++ Y + + + IPI +P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/48 (20%), Positives = 19/48 (39%)
Frame = +1
Query: 310 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
P + ++ Y YS Y ++ Y + + + IPI +P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/48 (20%), Positives = 19/48 (39%)
Frame = +1
Query: 310 PNVSPTIRYQYMYSPYESHKTYQLQAPQYSQPEVPIHQNMAPIPISIP 453
P + ++ Y YS Y ++ Y + + + IPI +P
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVP 126
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 425 IWLLYLSVFLPERALPRYLCSTFN 496
+W Y VF+ + L +Y + F+
Sbjct: 104 LWTSYKKVFMKDNILRQYFITFFS 127
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 425 IWLLYLSVFLPERALPRYLCSTFN 496
+W Y VF+ + L +Y + F+
Sbjct: 87 LWTSYKKVFMKDNILRQYFITFFS 110
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 217 AIVASSDAFFLKWGSDSAPPSSQKTWVQPLSP 312
A + S+ + GS S PSS ++ +SP
Sbjct: 74 AAITSTSPSYPGGGSSSPSPSSPSSFFSSVSP 105
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,144
Number of Sequences: 438
Number of extensions: 4089
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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