Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H17
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    28   0.27 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.47 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    26   1.1  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   5.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.8  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -2

Query: 193 ERDVSIRFQDQRVPESQDDQLAGTTPTIGISTRHPMQVLRVLM 65
           ER + I FQ++R+   +D+  +  TP +      P Q L  ++
Sbjct: 47  ERQIKIWFQNRRMKAKKDNSASANTPDLTYDGEIPQQSLESIV 89


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +2

Query: 419 HARISMKRWCVSILMHLPRQNMKRALSLSCVICSSVRSNLHRRNKD 556
           H    M R  +     L  Q   R L L C  C +  + L RRN D
Sbjct: 148 HKMNGMNRPLIKPSKRLVSQTATRRLGLCCTNCGTRTTTLWRRNND 193


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 120 VVPASWSSWLSGTRWSWN 173
           V P++W S   G+ W WN
Sbjct: 158 VPPSNWVSVFRGSAWEWN 175


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 184 RRAPGDHPAHNP 219
           +  PGD P+HNP
Sbjct: 412 KNEPGDSPSHNP 423


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
 Frame = +1

Query: 130 LAGHPGSLAPAG----PGTVWKRRAPGDHP 207
           L+G PG+  P G    PGT  ++  P  HP
Sbjct: 191 LSGLPGNPGPRGYAGIPGTKGEKGEPARHP 220


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 394  EDEVSNAHARSDLYEKMVRLDPNAPTEAEHEARAVTKLRYMQFREKQSSSAEQ 552
            +DE +   A++ L E   RLDP A     ++ R V + R    R+++    E+
Sbjct: 1022 DDECAILAAQAMLEEPANRLDPEAVRCTRNDLRNVAR-RTQTVRQREEQCGER 1073


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,977
Number of Sequences: 2352
Number of extensions: 13841
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)