Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H14
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.7  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 134 ATLAPEHCSPPQXXYHNKYVRY 69
           AT  P H  PP   Y + Y RY
Sbjct: 155 ATSLPLHYPPPPPVYTHHYARY 176


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 377 NHFI*NKNYKKYIIRT 330
           NH + N +YK++I+R+
Sbjct: 565 NHMVKNSHYKEHIMRS 580


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 356 NYKKYIIRTRVFTFLSNRAIESHAIFTYVV 267
           NY+    R+R+  F+    + S+ +F Y V
Sbjct: 124 NYENQRTRSRIHLFVRYVFVTSYLLFDYFV 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,724
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)