Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H12
(565 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 178 4e-46
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 150 1e-37
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 44 1e-05
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.15
SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual 30 0.20
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 30 0.20
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 29 0.62
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 28 0.82
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.82
SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyce... 28 1.1
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 28 1.1
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 27 1.9
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 3.3
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 3.3
SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr... 26 3.3
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 26 4.4
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 4.4
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 25 5.8
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 25 5.8
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 25 5.8
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 25 5.8
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 25 5.8
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 25 7.7
SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5 |Schiz... 25 7.7
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 25 7.7
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 178 bits (434), Expect = 4e-46
Identities = 85/144 (59%), Positives = 102/144 (70%)
Frame = +3
Query: 132 GPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIG 311
G K +T++DYYFDSY+H+GIHEEMLKD+VRTL+YR+A+ N HLF+ K VLD+G
Sbjct: 3 GNTKKSADSGLTAKDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVG 62
Query: 312 CGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEANRLSDXXXXXXXXXXXXXLPAEKV 491
CGTGILSMF A+AGA V V+ S I+ A +IVE N+LSD LP EKV
Sbjct: 63 CGTGILSMFCARAGAKHVYGVDMSEIIHKAVQIVEVNKLSDRITLIQGKMEEIQLPVEKV 122
Query: 492 DIIISEWMGYCLFYERMLDTVLYA 563
DII+SEWMGY L YE MLDTVL A
Sbjct: 123 DIIVSEWMGYFLLYESMLDTVLVA 146
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 150 bits (364), Expect = 1e-37
Identities = 76/140 (54%), Positives = 92/140 (65%)
Frame = +3
Query: 144 NVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTG 323
+VT ++ + YYF+SYA IH ML D VRT YR+ +YHNKH+F GKTVLD+GCGTG
Sbjct: 208 SVTPKKADNDSYYFESYAGNDIHFLMLNDSVRTEGYRDFVYHNKHIFAGKTVLDVGCGTG 267
Query: 324 ILSMFAAKAGATKVIAVECSNIVDYARKIVEANRLSDXXXXXXXXXXXXXLPAEKVDIII 503
ILSMF AKAGA KV AV+ S+I+ A N L+D LP KVDIII
Sbjct: 268 ILSMFCAKAGAKKVYAVDNSDIIQMAISNAFENGLADQITFIRGKIEDISLPVGKVDIII 327
Query: 504 SEWMGYCLFYERMLDTVLYA 563
SEWMGY L +E M+D+VL A
Sbjct: 328 SEWMGYALTFESMIDSVLVA 347
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 44.4 bits (100), Expect = 1e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 243 LTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNI-VDYARK 407
L + ++ ++ F GK +LDIGCG GILS A+ GA+ V AV+ S + ++ A+K
Sbjct: 63 LDFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGAS-VTAVDASPMAIEVAKK 117
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 30.7 bits (66), Expect = 0.15
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 EMESMDVAQESTSAASTPVAEDG-PDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRT 242
E E +D ++S A+S ED PD E D++FD Y+ G+H M +
Sbjct: 364 ETEGVD-KEDSDKASSVQGNEDEVPDTASETEHSEIEDFHFDPYSEKGVHIAMRYFDA-A 421
Query: 243 LTYRN 257
LT+R+
Sbjct: 422 LTHRD 426
>SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 30.3 bits (65), Expect = 0.20
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 279 LFKGKTVLDIGCGTGILS-MFAAKAGATKVIAVECSNI-VDYARKIVE 416
LF +VLDIGC G +S A+ GA+ V+ ++ ++ + ARK +E
Sbjct: 33 LFYEASVLDIGCNNGTVSAQIASIFGASFVLGLDIDHVLIQKARKHLE 80
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.20
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 288 GKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEAN 422
G VL++G GTG++S+ AK G+ + + + D R+ N
Sbjct: 171 GMRVLELGAGTGLVSILCAKMGSIVLATDGDTKVCDGVRENARLN 215
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 28.7 bits (61), Expect = 0.62
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +3
Query: 129 DGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLK-DEVRTLTYRNAMYHNKHLF---KGKT 296
D P ++ ++S+ F+ + + ++ K D+ R L + N + F G +
Sbjct: 21 DNPSTLAISKVISSKILQFEDNSETSLRHDLPKYDQDRLLLTSDDDLTNVNNFWKKSGMS 80
Query: 297 VLDIGCGTGILS 332
+LD CGTG++S
Sbjct: 81 ILDFACGTGLIS 92
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 28.3 bits (60), Expect = 0.82
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 152 SNVLVGTIFSDRRRRSRGAFLGDIHTFHFKYFMYGEKSYLVLLF 21
S +LVGT + D R F+GDI+ F + G ++ F
Sbjct: 560 SPILVGTTYIDPRSLYERGFIGDIYQFLYNAVNVGSVAFDATFF 603
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 0.82
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1
Query: 556 STVSSIRS*NKQ*PIHSDIIMSTFSAGNSTSSTFPLTISMTSLSLFASTILRA*STILEH 377
ST+SS S + S I S+ S+ +S SST + SM+S S F+S+ + STI
Sbjct: 288 STISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLS-SSSMSSSSSFSSSPTSSSSTISSS 346
Query: 376 STA 368
S++
Sbjct: 347 SSS 349
>SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 264 YHNKHLFKGKTVLDIGCGTGILSM-FAAKAGATKVIAVECS-NIVDYARK 407
Y K++ K +LD+GCG G +++ F +VI VE S ++D A +
Sbjct: 33 YMLKYVKKTDRILDVGCGPGTITVGFPKYVPEGEVIGVEPSQELLDKAEE 82
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 517 PIHSDIIMSTFSAGNSTSSTFPLTISMTSLSLFASTI 407
P SDI+ S S GN+ +S F + I + + + I
Sbjct: 301 PYDSDILSSNASKGNAAASPFVVAIKLAQIKVMPDVI 337
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 197 CIGIEIVISR---SHLLSSNVLVGTIFSDRRRRSRGAFLGDIHTFHFK 63
CIG + + + + + N+L+G S R R+S F GD T F+
Sbjct: 359 CIGTDKAVPQKFGADFHNENILLGAYISTRWRQSHMGFFGDHSTLLFQ 406
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 299 YCFSFEQMFIVVHS-IPVSECSNFVF*HFLVDAEMCIGIEIVISRSHLLSSNVL 141
+ F Q+FIV S P+ +F+F FL +C+ + + S SHLLS +L
Sbjct: 135 FLFFLSQIFIVYFSSFPIL---HFLFFFFLC---VCVFLSFLFSLSHLLSLAIL 182
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 469 TSSTFPLTISMTSLSLFASTILRA*STILEHST--AITFVAPAFAANMERIPVPQPMSNT 296
TS++ P+T+S +SLS F + +T +T + T + F +N IP P S +
Sbjct: 251 TSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSPFYSNSSVIPTSVPSSVS 310
Query: 295 VF 290
F
Sbjct: 311 SF 312
>SPBC336.02 |||18S rRNA dimethylase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 279 LFKGKTVLDIGCGTGILSMFAAKAGATKVIAVE 377
L + TVL++G GTG L++ + A KVIAVE
Sbjct: 48 LKQSDTVLEVGPGTGNLTVRMLEK-ARKVIAVE 79
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -3
Query: 479 W*LYFFNLSLNYF--DDITESICFNNLTCIINYIGTLDSYHFCSA 351
W L+L+Y D+I + N L C+IN++ D Y + +A
Sbjct: 295 WGFQIMELALDYVSSDNIGDIFSKNFLHCLINHLSDEDRYLYRAA 339
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = -3
Query: 212 VDAEMCIGIEIVISRSHLLSSNVLVGTIFSDRR-------RRSRGAFLGDIHTFHFKYFM 54
+DA+ IGIE SR S+ VG+ F+ R R + L D H F FK+++
Sbjct: 200 IDAKQLIGIEEKTSRLLYAKSSADVGSDFTFRMSLLWKHPRVTLNTNLSDAHIFVFKHWV 259
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 5.8
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1
Query: 493 STFSAGNSTSSTFPLTISMTSLSLFASTILRA*STILEHSTAITFVA 353
ST S+ ++++ST P TI+ T AST+ +T + +TA+T A
Sbjct: 178 STTSSYHNSTSTPPPTITSTK----ASTVTSTEATTVTTTTAVTVTA 220
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 285 KGKTVLDIGCGTGILSMF-AAKAGATKVIAVECSNIVDYARK 407
KG+ VL++G G GI+ F K + VI +++ + RK
Sbjct: 185 KGRRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRK 226
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 300 LDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEAN 422
L++G GTG++ + AA +V+ + +IV+ + V+ N
Sbjct: 140 LELGAGTGLVGISAAIQLGWQVVCTDLPDIVENMQYNVDYN 180
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 39 RLFPVHKILEMESMDVAQESTSAASTPVAEDGPDKNVTAE 158
++FPV + E +V +E+ T +ED DK+ T+E
Sbjct: 512 KIFPVTECGEKMLSEVPEEADDYLLTLASEDSIDKDSTSE 551
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 256 MLCTTINICSKEKQY*TLAVEREFSPCLLRRPA 354
ML + +NICSKE+ Y T +E +P ++PA
Sbjct: 393 MLISMLNICSKEELYETDL--KESAPTQHKQPA 423
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 297 VLDIGCGTGILSMFAAKAG 353
+LDIGCG+GI + G
Sbjct: 51 ILDIGCGSGISTQIGESQG 69
>SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 42 LFPVHKILEMESMD 83
LFP KIL+ME+MD
Sbjct: 106 LFPTTKILQMETMD 119
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.0 bits (52), Expect = 7.7
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 HLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS-NIVDYARKIVEANRLSDXXXXXX 452
+L +LD+GCG G+L+ + +V+ ++ S +++ AR++ L+
Sbjct: 30 NLSSSDELLDLGCGDGVLTN-ELVSQCRRVVGIDASPDMIKAAREL----GLNAYVIPGE 84
Query: 453 XXXXXXXLPAEKVDIIIS 506
+P+E D++ S
Sbjct: 85 KLLDASEIPSESFDVVFS 102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,190
Number of Sequences: 5004
Number of extensions: 48877
Number of successful extensions: 162
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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