Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H12
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 189 1e-48
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 38 0.007
Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical pr... 37 0.012
U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical pr... 36 0.027
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 34 0.061
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 34 0.061
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 34 0.061
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 32 0.25
L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 30 1.0
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 30 1.0
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 30 1.3
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 30 1.3
Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 27 9.3
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 27 9.3
U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical pr... 27 9.3
U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical pr... 27 9.3
U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical pr... 27 9.3
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 27 9.3
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 189 bits (461), Expect = 1e-48
Identities = 95/148 (64%), Positives = 107/148 (72%), Gaps = 3/148 (2%)
Frame = +3
Query: 129 DGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDI 308
D P A+E+TS+DYYFDSYAHFGIHEEMLKDEVRT TYRN++YHN HLFK K V+D+
Sbjct: 10 DAPVAAPAAKELTSKDYYFDSYAHFGIHEEMLKDEVRTTTYRNSIYHNSHLFKDKVVMDV 69
Query: 309 GCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEANRLSD-XXXXXXXXXXXXXLPA- 482
G GTGILSMFAAKAGA KV A+E SN+ +RKI+ N L LP
Sbjct: 70 GSGTGILSMFAAKAGAKKVFAMEFSNMALTSRKIIADNNLDHIVEVIQAKVEDVHELPGG 129
Query: 483 -EKVDIIISEWMGYCLFYERMLDTVLYA 563
EKVDIIISEWMGYCLFYE ML+TVL A
Sbjct: 130 IEKVDIIISEWMGYCLFYESMLNTVLVA 157
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/118 (26%), Positives = 54/118 (45%)
Frame = +3
Query: 210 HEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNI 389
H M+ D R + A+ ++ + V DIG GTGILS AA+ E +
Sbjct: 142 HIRMINDVKRNEAFAKAL-NDTIKSRITVVFDIGSGTGILSAIAARKTNLVTALEENMCL 200
Query: 390 VDYARKIVEANRLSDXXXXXXXXXXXXXLPAEKVDIIISEWMGYCLFYERMLDTVLYA 563
++++++ N + EK DI++SE + C+F E++++T L A
Sbjct: 201 TMISKEVLKRNGVESRVNVHAKNSTYFET-CEKADIVVSETLDCCVFGEKIVETFLDA 257
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 297 VLDIGCGTGILSMFAAKAGATKVIAVEC-SNIVDYARKIVEANRLSD-XXXXXXXXXXXX 470
VLDIG GTG+LS+ AA+ GA KV A+E + D AR I + SD
Sbjct: 68 VLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSPWSDKITVISERSTDVS 127
Query: 471 XLPAEKVDIIISE 509
+ + DII++E
Sbjct: 128 QIGGSRADIIVAE 140
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 183 FDSYAHFGIHEEML-KDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGAT 359
F S A+ ++ L +D + T T + A H+ GK VLD+GCG G S + GA
Sbjct: 4 FPSEAYTEAQQKWLGRDHLITPTIKKAF---GHILVGKEVLDVGCGNGHYSFDFLRWGAH 60
Query: 360 KVIAVECS 383
KV V+ S
Sbjct: 61 KVFGVDNS 68
>Z66514-2|CAA91342.1| 229|Caenorhabditis elegans Hypothetical
protein K01A11.2 protein.
Length = 229
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 270 NKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIA 371
N+ LF GK+VL++GCG + S+ A GA +V A
Sbjct: 70 NQTLFAGKSVLELGCGAALPSILTAVHGAKEVFA 103
>U97194-6|AAB52451.2| 244|Caenorhabditis elegans Hypothetical
protein C37A2.6 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 NKHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKI-VEANRLSD 434
NK LF+G ++D G G G S+ A+ GA K++A + + K+ N L D
Sbjct: 71 NKPLFQGSEIVDFGAGCGSASISASICGAKKILANDIDRYALLSTKLNFHLNNLRD 126
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 34.3 bits (75), Expect = 0.061
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 282 FKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEANR 425
F+GK VL++G GTG+ + A GA VI + + K VEANR
Sbjct: 52 FEGKKVLELGSGTGVGGIALAALGA-DVIITDLPERLALIEKNVEANR 98
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.061
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 282 FKGKTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKIVEANR 425
F+GK VL++G GTG+ + A GA VI + + K VEANR
Sbjct: 13 FEGKKVLELGSGTGVGGIALAALGA-DVIITDLPERLALIEKNVEANR 59
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 34.3 bits (75), Expect = 0.061
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 273 KHLFKGKTVLDIGCGTGILSMFAAKAGATKVIAVECS 383
K+ K K VLDIGCG G+ S + GA KV+ + S
Sbjct: 33 KYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNS 69
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical
protein C14B1.10 protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +3
Query: 177 YYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAGA 356
Y D Y + H DE R +++ + +G + D+GCG G K G
Sbjct: 358 YVSDVYENIASHF----DETRHSSWKAVKQFINEIPRGSVMYDVGCGNG--KYLIPKDGL 411
Query: 357 TKVIAVECSNIVDYARK 407
K+ C + D ARK
Sbjct: 412 LKIGCDMCMGLCDIARK 428
>L12018-9|AAA65465.2| 243|Caenorhabditis elegans Hypothetical
protein F22B7.9 protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.57
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +3
Query: 282 FKGKTVLDIGCGTGILSMFAAKAGATKVI--AVECSNIVDYARKIVEANRL 428
F GK+VL+IG TG+ S++A + GA ++ ++ +++ Y R ++ N +
Sbjct: 82 FDGKSVLEIGFVTGLPSVYAFENGAEEIAMHTMDKTSLELYCRPTLKRNNI 132
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 282 FKGKTVLDIGCGTGILSMFAA 344
F+GK ++DIGCG G+L AA
Sbjct: 46 FEGKKLIDIGCGCGMLMTTAA 66
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 291 KTVLDIGCGTGILSMFAAKAGATKVIAVECSNIVDYARKI-VEANRLSD 434
K VL+IGCG+G++S F +A V +V +++ +A + +E +L+D
Sbjct: 58 KLVLEIGCGSGVVSTFVNQALGGNVTSV-ATDLNPHALDVTLETAKLND 105
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 273 KHLFKGKTVLDIGCGTGILSMFAAK-AGATKVIAVEC-SNIVDYARK 407
K F+ K LDIGC G L++ AK ++I ++ +++ ARK
Sbjct: 147 KDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARK 193
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 273 KHLFKGKTVLDIGCGTGILSMFAAK-AGATKVIAVEC-SNIVDYARK 407
K F+ K LDIGC G L++ AK ++I ++ +++ ARK
Sbjct: 144 KDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARK 190
>Z83234-1|CAB70169.1| 313|Caenorhabditis elegans Hypothetical
protein K09E4.3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 297 VLDIGCGTGILSMFAAKAGATKVIAVECS 383
VLDIGCG G ++ K K+I V+ S
Sbjct: 49 VLDIGCGVGHIAPHLIKENVGKIIQVDMS 77
>Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical
protein C08F8.5 protein.
Length = 585
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 458 LSLNYFDDITESICFNNLTCIIN-YIGTLDSYHFCSAGL 345
L L +FDD+ SICF CII+ Y+ L+S + GL
Sbjct: 304 LCLEFFDDLILSICFEG--CIIDFYLYMLNSSQKITPGL 340
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 633 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 692
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 693 QYTRRYHHGDSIHKPDT 709
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 622 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 681
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 682 QYTRRYHHGDSIHKPDT 698
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 622 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 681
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 682 QYTRRYHHGDSIHKPDT 698
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = -1
Query: 508 SDIIMSTFSAGNSTSSTFPLTISMTS-LSLFASTILRA*STILEHSTAITFVAP 350
++I M+TFS ++SST L+ S T+ +S T+ R S E STA T + P
Sbjct: 82 TNIPMTTFSTNEASSSTKLLSTSSTAEISSTTRTVSR--SIKPETSTASTTIRP 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 213 EEMLKDEVRTLTYRNAMYHNKHLFKGK 293
E + DEVRT TYR +++H + L GK
Sbjct: 77 EPTVVDEVRTGTYR-SLFHPEQLLSGK 102
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 633 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 692
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 693 QYTRRYHHGDSIHKPDT 709
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 622 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 681
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 682 QYTRRYHHGDSIHKPDT 698
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +3
Query: 78 MDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD-SYAHFGIHEEMLKDEVRTLT-- 248
+DV S + P K E++ +DYYF S A IH L EV+
Sbjct: 622 VDVRHSGASRRNLAKRLSHPGKEDIKEQIDPKDYYFSASLASDPIHRTELSREVQPANIQ 681
Query: 249 -YRNAMYHNKHLFKGKT 296
Y +H + K T
Sbjct: 682 QYTRRYHHGDSIHKPDT 698
>U39851-5|AAZ32802.1| 408|Caenorhabditis elegans Hypothetical
protein C23G10.7a protein.
Length = 408
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 246 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 353
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical
protein C23G10.7b protein.
Length = 572
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 246 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 353
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>U39851-3|AAZ32804.1| 563|Caenorhabditis elegans Hypothetical
protein C23G10.7c protein.
Length = 563
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 246 TYRNAMYHNKHLFKGKTVLDIGCGTGILSMFAAKAG 353
+Y N + ++ L K +DIGCG G+L K G
Sbjct: 229 SYINELVNSDLLPKPNKFVDIGCGNGLLVHLLNKIG 264
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 213 EEMLKDEVRTLTYRNAMYHNKHLFKGK 293
E + DEVRT TYR +++H + L GK
Sbjct: 49 EPTVVDEVRTGTYR-SLFHPEQLLSGK 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,304,526
Number of Sequences: 27780
Number of extensions: 278982
Number of successful extensions: 885
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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