Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_H12
(565 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.8
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 3.7
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 3.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.9
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 6.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.6
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 209 DAEMCIGIEIVISRSHLLS 153
D E+CIG +I++S LLS
Sbjct: 1238 DYEVCIGSQIMVSPETLLS 1256
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 120 YIINIEQIPVPVPVYYGNFP 139
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 345 YIINIEQIPVPVPVYYGNFP 364
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 286 KEKQY*TLAVEREFSPCL 339
+EKQY T+A EFS L
Sbjct: 29 REKQYLTIAERAEFSSSL 46
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 109 YIINIEQIPVPVPIYCGNFP 128
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 346 FAANMERIPVPQPMSNTVFP 287
+ N+E+IPVP P+ FP
Sbjct: 350 YIINIEQIPVPVPIYCGNFP 369
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 119 NIEQIPVPVPIYCGNFP 135
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 115 NIEQIPVPVPIYCGNFP 131
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 340 NIEQIPVPVPIYCGNFP 356
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 337 NMERIPVPQPMSNTVFP 287
N+E+IPVP P+ FP
Sbjct: 342 NIEQIPVPVPVYCGNFP 358
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 517 PIHSDIIMSTFSAGNSTSSTFP 452
P HS ST A +TSS +P
Sbjct: 69 PQHSGSSASTSPAARTTSSMYP 90
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/13 (38%), Positives = 8/13 (61%)
Frame = +1
Query: 511 GWATACFMNVCWT 549
G+ C+ +CWT
Sbjct: 484 GYYPCCWWKICWT 496
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/13 (38%), Positives = 8/13 (61%)
Frame = +1
Query: 511 GWATACFMNVCWT 549
G+ C+ +CWT
Sbjct: 537 GYYPCCWWKICWT 549
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -3
Query: 428 ESICFNNLTCIINYI 384
+ +CFN+L II ++
Sbjct: 79 QDVCFNDLKFIIEFV 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,856
Number of Sequences: 438
Number of extensions: 3824
Number of successful extensions: 29
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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