Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H05
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    27   0.34 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   7.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   9.7  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   9.7  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 136 HHQHYHVHQDAYGACRYDHDH 74
           HH H+H H  A     Y H H
Sbjct: 505 HHHHHHHHPTAADLAGYHHQH 525


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 127 AGGEHHHRINMDKYHPGYFG 186
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172



 Score = 22.2 bits (45), Expect = 9.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 136 HHQHYHVH 113
           HHQH+H H
Sbjct: 118 HHQHHHQH 125


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 220 NKDFCPVLNLDKLWT 264
           N+DF PV+ +D+ +T
Sbjct: 782 NEDFVPVIEIDETFT 796


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 136 HHQHYHVHQD 107
           HH H+H HQ+
Sbjct: 657 HHHHHHHHQN 666


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,734
Number of Sequences: 2352
Number of extensions: 8819
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)