Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H04
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q72WZ5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.23 
UniRef50_Q8I2M6 Cluster: Putative uncharacterized protein PFI139...    36   0.53 
UniRef50_Q6BAA4 Cluster: Fc receptor-like B; n=26; Theria|Rep: F...    35   0.70 
UniRef50_Q4RVZ3 Cluster: Chromosome 9 SCAF14991, whole genome sh...    33   3.7  
UniRef50_Q9LMF9 Cluster: F16A14.21; n=4; core eudicotyledons|Rep...    33   3.7  
UniRef50_Q6YVJ9 Cluster: Putative uncharacterized protein P0724B...    33   3.7  
UniRef50_A3LW05 Cluster: Putative transporter or flippase; n=1; ...    33   3.7  
UniRef50_Q75DM2 Cluster: ABL005Cp; n=2; Saccharomycetaceae|Rep: ...    31   8.6  
UniRef50_Q4WFP4 Cluster: Integral membrane protein; n=2; Trichoc...    31   8.6  

>UniRef50_Q72WZ5 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 10987)
          Length = 407

 Score = 36.7 bits (81), Expect = 0.23
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +3

Query: 6   RMVSPNLIIKAILIT*FFSDYLAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFL 185
           +M+ P ++  A+      +D+L   Y  F+ L  T     RY I+I +   L+   Y+F+
Sbjct: 11  KMIEPTILFIALFFLSILTDFLTPTYEYFLLLFITLIISSRYGISIALFTFLEAMIYIFI 70

Query: 186 S 188
           S
Sbjct: 71  S 71


>UniRef50_Q8I2M6 Cluster: Putative uncharacterized protein PFI1390w;
           n=3; Plasmodium|Rep: Putative uncharacterized protein
           PFI1390w - Plasmodium falciparum (isolate 3D7)
          Length = 268

 Score = 35.5 bits (78), Expect = 0.53
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +3

Query: 39  ILIT*FFSDYLAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCV 218
           +++  F+   + + +F F+  I  +FY   Y I I  S   + YF+ F S     + KC 
Sbjct: 20  LILLYFYISSIKYSFFSFLYNIFIYFYFLMYDILIFDSSEKNTYFFFFCSSVMEEKGKCK 79

Query: 219 RLGRPSPYS 245
           ++   SPYS
Sbjct: 80  KI-MESPYS 87


>UniRef50_Q6BAA4 Cluster: Fc receptor-like B; n=26; Theria|Rep: Fc
           receptor-like B - Homo sapiens (Human)
          Length = 426

 Score = 35.1 bits (77), Expect = 0.70
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>UniRef50_Q4RVZ3 Cluster: Chromosome 9 SCAF14991, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 9 SCAF14991, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 882

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 129 YCINIPVSLLL-DGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPMPKP 287
           Y I +P  +L  DG  Y F+  +K++  +C   G P P      SST LP+  P
Sbjct: 182 YVIELPPQILTEDGSTYTFVEGQKAVL-ECETFGSPKPKVTWESSSTSLPLADP 234


>UniRef50_Q9LMF9 Cluster: F16A14.21; n=4; core eudicotyledons|Rep:
           F16A14.21 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 319

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 24/55 (43%), Positives = 27/55 (49%)
 Frame = +3

Query: 240 YSYVHPSSTILPMPKPTKHFILYRFQYILYQNATFSYSFNFSLVCPSTLAKLLNS 404
           Y   H  + I  M   T H    RFQ  LY    F YSF+F L  P TLA L+NS
Sbjct: 157 YVLTHRENQICTMKTRTNH----RFQ--LYSTQVFFYSFSFLL--PMTLAILINS 203


>UniRef50_Q6YVJ9 Cluster: Putative uncharacterized protein
           P0724B10.9; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0724B10.9 - Oryza sativa subsp. japonica (Rice)
          Length = 203

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 253 IHLLPSFLCQNQLSILFSIVFNTSSTKTQPSLIL 354
           +HLLP FLC +  S LF I    SS   +PS ++
Sbjct: 11  VHLLPLFLCSSSSSSLFLIAPPPSSAVAEPSCVV 44


>UniRef50_A3LW05 Cluster: Putative transporter or flippase; n=1;
           Pichia stipitis|Rep: Putative transporter or flippase -
           Pichia stipitis (Yeast)
          Length = 507

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 111 FFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPM 278
           FF +Q  C+ I  + L+ G ++LF  L  +I  +   L +P  YSY+     IL +
Sbjct: 171 FFIMQLVCLTIAPAFLMGGIYFLFAQL-VAIHGRKFSLLKPMWYSYLFIGCDILSL 225


>UniRef50_Q75DM2 Cluster: ABL005Cp; n=2; Saccharomycetaceae|Rep:
           ABL005Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 849

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 281 WHRKDGRRWMNIT--IR*GST*ANTFRPDRLF*RKEKVK 171
           WH  DGRRW+N    +R   T     R DRLF + E VK
Sbjct: 394 WHTNDGRRWLNCCWYLRPEQT---VHRVDRLFYKNEVVK 429


>UniRef50_Q4WFP4 Cluster: Integral membrane protein; n=2;
           Trichocomaceae|Rep: Integral membrane protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 227

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 30  IKAILIT*FFSDYLAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKS-IR 206
           +K I+   FF+ YL   YF  + L+  F      C+   ++ L+ G F+ +  L  + +R
Sbjct: 78  VKVIITDLFFAIYLTVIYFTML-LVDRFVSQHVVCVYGNLACLVSGLFHTYAVLRAAMVR 136

Query: 207 SKC--VRLGRP 233
            K    R+GRP
Sbjct: 137 YKAYLARVGRP 147


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,625,984
Number of Sequences: 1657284
Number of extensions: 7250154
Number of successful extensions: 18960
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18943
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)