Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H04
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   9.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.3  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = +2

Query: 68  PSFLLF*IHRSHTYILLHTKILYKHT 145
           P++L+   ++++TY++L+  +L KH+
Sbjct: 17  PNYLIL-SNKNNTYLVLNKYLLVKHS 41


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +3

Query: 27  IIKAILIT*FFSDYLAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFY 176
           ++  + I  F+  +L FC    I  +H  F +  Y     + +LL  Y++
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYF 301



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 57  FSDYLAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSL 191
           F+ +L F     I L   +FY       + + LL+  Y++ ++ L
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHL 266


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 30  IKAILIT*FFSDYLAFCYFKFIALIHTFF 116
           IK +L+  FF +   +C+  ++ ++ TF+
Sbjct: 63  IKIVLM--FFKEASLYCFNYYVIVVTTFY 89


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = +3

Query: 123 QRYCINIPVSLLLDGYFY---LF----LSLEKSIRSKCVRLGRP 233
           Q+ C+N+ ++  + GY +   LF    L L + + S  +R+  P
Sbjct: 37  QKTCLNLSINYCICGYIFSAILFSLSILGLTEDLNSAPIRMKNP 80


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 177 LFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPM 278
           L  S  + +R++  ++ R    SY+   +T++PM
Sbjct: 24  LLPSNSREMRNRAEKMRRDKLNSYIGELATLVPM 57


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 251 SSIFYHPSYAKTN*AFYSLSFSIHPLPKRN 340
           SS++Y P     N  F +L       PKRN
Sbjct: 217 SSVYYDPRALAPNLDFITLEAFDFYTPKRN 246


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 359 VKRIREGCVLVEDVLKTIE 303
           + R+REG   +  VLK+IE
Sbjct: 113 ILRLREGMNSLSRVLKSIE 131


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 231 PSPYSYVHPSSTILPM 278
           P P   ++PSS ++P+
Sbjct: 346 PYPSHSIYPSSNLMPL 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,227
Number of Sequences: 336
Number of extensions: 2152
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)