Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H04
         (447 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF064728-1|ABK41911.1|  426|Homo sapiens Fc receptor-like B prot...    35   0.11 
DQ021957-1|AAY42534.1|  426|Homo sapiens Fc receptor related gen...    35   0.11 
BC038564-1|AAH38564.2|  292|Homo sapiens FCRLB protein protein.        35   0.11 
AY786314-1|AAX11390.1|  426|Homo sapiens FREB-2 protein.               35   0.11 
AY670683-1|AAT77987.1|  426|Homo sapiens FCRL2a protein.               35   0.11 
AL359541-6|CAH74155.2|  426|Homo sapiens Fc receptor-like B prot...    35   0.11 
AL591682-1|CAI40398.1|  264|Homo sapiens RPEL repeat containing ...    29   5.5  
AL391385-1|CAI41201.1|  264|Homo sapiens RPEL repeat containing ...    29   5.5  
AL354680-1|CAI41066.1|  264|Homo sapiens RPEL repeat containing ...    29   5.5  
AL008729-1|CAI95667.1|  264|Homo sapiens RPEL repeat containing ...    29   5.5  

>EF064728-1|ABK41911.1|  426|Homo sapiens Fc receptor-like B
           protein.
          Length = 426

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>DQ021957-1|AAY42534.1|  426|Homo sapiens Fc receptor related gene
           protein.
          Length = 426

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>BC038564-1|AAH38564.2|  292|Homo sapiens FCRLB protein protein.
          Length = 292

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 98  LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 157

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 158 LDPASTTAPAP 168


>AY786314-1|AAX11390.1|  426|Homo sapiens FREB-2 protein.
          Length = 426

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>AY670683-1|AAT77987.1|  426|Homo sapiens FCRL2a protein.
          Length = 426

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>AL359541-6|CAH74155.2|  426|Homo sapiens Fc receptor-like B
           protein.
          Length = 426

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 69  LAFCYFKFIALIHTFFYIQRYCINIPVSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSY 248
           L F ++K+   +  F +   Y +  P    L+ Y+    +  +S+R +   L  P P S 
Sbjct: 232 LQFAFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSP 291

Query: 249 VHPSSTILPMP 281
           + P+ST  P P
Sbjct: 292 LDPASTTAPAP 302


>AL591682-1|CAI40398.1|  264|Homo sapiens RPEL repeat containing 1
           protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 147 VSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPMPKPTKHFIL 305
           +S  L  +F+LF SL  S+ +  + L  PSP+    PS    P+P P+  F L
Sbjct: 10  LSFFLSPFFFLFPSLSHSLPTPSLPL--PSPFP--SPSPVREPLPLPSSPFRL 58


>AL391385-1|CAI41201.1|  264|Homo sapiens RPEL repeat containing 1
           protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 147 VSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPMPKPTKHFIL 305
           +S  L  +F+LF SL  S+ +  + L  PSP+    PS    P+P P+  F L
Sbjct: 10  LSFFLSPFFFLFPSLSHSLPTPSLPL--PSPFP--SPSPVREPLPLPSSPFRL 58


>AL354680-1|CAI41066.1|  264|Homo sapiens RPEL repeat containing 1
           protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 147 VSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPMPKPTKHFIL 305
           +S  L  +F+LF SL  S+ +  + L  PSP+    PS    P+P P+  F L
Sbjct: 10  LSFFLSPFFFLFPSLSHSLPTPSLPL--PSPFP--SPSPVREPLPLPSSPFRL 58


>AL008729-1|CAI95667.1|  264|Homo sapiens RPEL repeat containing 1
           protein.
          Length = 264

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 147 VSLLLDGYFYLFLSLEKSIRSKCVRLGRPSPYSYVHPSSTILPMPKPTKHFIL 305
           +S  L  +F+LF SL  S+ +  + L  PSP+    PS    P+P P+  F L
Sbjct: 10  LSFFLSPFFFLFPSLSHSLPTPSLPL--PSPFP--SPSPVREPLPLPSSPFRL 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,711,482
Number of Sequences: 237096
Number of extensions: 1094379
Number of successful extensions: 3684
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3680
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)