Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H03
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O82966 Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralston...    33   2.5  
UniRef50_O96139 Cluster: 5'-3' exonuclease, N-terminal resolvase...    32   4.3  
UniRef50_Q5TSI7 Cluster: ENSANGP00000027961; n=1; Anopheles gamb...    31   7.5  
UniRef50_Q5T749 Cluster: Keratinocyte proline-rich protein; n=97...    31   7.5  
UniRef50_Q8YVM1 Cluster: Alr1954 protein; n=4; Nostocaceae|Rep: ...    31   9.9  
UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1; ...    31   9.9  

>UniRef50_O82966 Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralstonia
           solanacearum (Pseudomonas solanacearum)
          Length = 364

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = -2

Query: 272 SGRARTRPIYRELAQVLQQNN-SNRCCRLHRSQCPSRRGMKSGIEYHQL--WVVQSPPAD 102
           SGR  T P YR+L Q+          C   R  C + +G  +G++  Q   W ++ PP D
Sbjct: 272 SGRPETAPAYRQLRQIRSMPTVIGGACTSTRCTCYTAQGTDAGLDDMQCREW-IRKPPFD 330

Query: 101 --RAVRLSREPL 72
             R  + ++EP+
Sbjct: 331 PYREPQAAQEPI 342


>UniRef50_O96139 Cluster: 5'-3' exonuclease, N-terminal
           resolvase-like domain, putative; n=1; Plasmodium
           falciparum 3D7|Rep: 5'-3' exonuclease, N-terminal
           resolvase-like domain, putative - Plasmodium falciparum
           (isolate 3D7)
          Length = 577

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +3

Query: 312 CSATSLHRALEQCSPQFVTRNTHLLQSINDIAQKKNKK 425
           CS+  +HR ++  + ++V +N ++ Q  NDI +KK KK
Sbjct: 53  CSSKFIHR-IKSVNKRYVEKNEYIQQIDNDIEEKKKKK 89


>UniRef50_Q5TSI7 Cluster: ENSANGP00000027961; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000027961 - Anopheles gambiae
           str. PEST
          Length = 330

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 108 WRRLYNPQLMILYS*LHSTTGRTLTPVETTTTIR 209
           W++  N  LM+ Y+  HSTTG+T T +    TIR
Sbjct: 297 WKKDLNEYLMMYYTTPHSTTGKTPTELMFGRTIR 330


>UniRef50_Q5T749 Cluster: Keratinocyte proline-rich protein; n=97;
           Theria|Rep: Keratinocyte proline-rich protein - Homo
           sapiens (Human)
          Length = 579

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = -2

Query: 209 SNRCCRLHRSQCPSRRGMKSGIEYHQLWVVQSPPADRAVRLSREPLEPGPPIQRES 42
           ++RC R   S C  RRG K  IE      + SP   R V   R P+E  PPI+R S
Sbjct: 306 NSRCPRRPISSCSQRRGPKCRIE------ISSPCCPRQVPPQRCPVEI-PPIRRRS 354


>UniRef50_Q8YVM1 Cluster: Alr1954 protein; n=4; Nostocaceae|Rep:
           Alr1954 protein - Anabaena sp. (strain PCC 7120)
          Length = 138

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 62  PPIQRESTGNAYRRPLVAPR 3
           PPI RE +GNA  RP+V PR
Sbjct: 117 PPISRERSGNAPPRPVVKPR 136


>UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1202

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
 Frame = -2

Query: 188 HRSQCPSRRGMKSGIEYHQLWVVQS--PPADRAVRLSREPLEPGPPIQRESTGNAYRRPL 15
           H+S  PS  G  S  +YHQ W       P   A  L   P  P PP     T + +   L
Sbjct: 116 HQSSIPSYGGGVSSGDYHQQWASNPTYAPQQPATSLPPPPPPPPPPPVTVDTSSYHNPAL 175

Query: 14  VAP 6
             P
Sbjct: 176 SVP 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,283,031
Number of Sequences: 1657284
Number of extensions: 6605271
Number of successful extensions: 18210
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18203
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)