Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H03
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.5  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         22   7.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    22   7.9  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +1

Query: 4    RGATSGRRYAFPVDSRCIXXXXXXXXXXXXTA--RSAGG--DCTT 126
            R AT GR++ + V S C+            T+  R AG   +CT+
Sbjct: 1299 RKATDGRQHEYAVPSNCLLDTTHETYNTTATSCERIAGETFECTS 1343


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 241 RYIGRVRALPEAYISIYK*STRGAAPRRHCTAHLNN 348
           R +  +R L E+Y+ I   +TR   P+      +NN
Sbjct: 96  RQVETIRNLVESYMRIVTKTTRDMVPKAIMMLIINN 131


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = -3

Query: 370  RVTNCGEHCSSARCSDVAEQRRG*IIYRLKCRLQVEREHGQ 248
            R   CGE  S    S    +RR  I  R+    Q  R+H Q
Sbjct: 1066 REEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQ 1106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,001
Number of Sequences: 2352
Number of extensions: 6931
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)