Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H02
         (582 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.003
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.043
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   0.92 
UniRef50_Q5KE09 Cluster: Mitotic spindle assembly-related protei...    33   6.5  
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   8.6  
UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2; ...    32   8.6  
UniRef50_Q4Q3N4 Cluster: Putative uncharacterized protein; n=2; ...    32   8.6  
UniRef50_P51906 Cluster: Excitatory amino acid transporter 3; n=...    32   8.6  

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -2

Query: 449 GKCFR*CSSCDDPRISPLTSQYECPQ 372
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.043
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = +2

Query: 458 FHQSRTKVRGSKAIRYRPSSNRK 526
           F   RTKVRGSK IRYRPSSN K
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 0.92
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +2

Query: 458 FHQSRTKVRGSKAIRYRPSSNRK 526
           FH  RTKV GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_Q5KE09 Cluster: Mitotic spindle assembly-related protein,
           putative; n=2; Filobasidiella neoformans|Rep: Mitotic
           spindle assembly-related protein, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 2176

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -2

Query: 266 RFEHSNLFKVKLSAHLDTHRRAPR*DFDIEPAFNRRLTDDMLRRRVSITANAVHRQRGAQ 87
           R +H N +K +LSA+ D    + +   D +P F   + D  L ++  + ANAV +++G +
Sbjct: 19  RSQHKN-WKARLSAYNDVISGSAKTASDTDPFFQPFVNDGALLKKWCLDANAVAQEKGIE 77

Query: 86  MQL 78
             L
Sbjct: 78  AVL 80


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -1

Query: 438 SLMFVLRRSKNFTSNVAIRMPPVIPINHYLG 346
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


>UniRef50_A0QK95 Cluster: Putative uncharacterized protein; n=2;
           Mycobacterium avium|Rep: Putative uncharacterized
           protein - Mycobacterium avium (strain 104)
          Length = 380

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 109 CTGSAAHKCNYELFNRNNFSIRYWSWN 29
           C G   H C YE+F++    +R+W+WN
Sbjct: 154 CVGFV-HNCYYEIFDQLGPQLRWWAWN 179


>UniRef50_Q4Q3N4 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 975

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +3

Query: 120 GDTDTSAEHIVGEPAVKRRFNIKILSRCSSVSVEVGRQFYFEQIRVLKAG 269
           GD++TS+ H V EP  +RR    ILS C + S    R+  F   R L +G
Sbjct: 572 GDSETSSGHRVEEPVRRRRSGDAILSICRTASFGHPRE-SFSVTRSLSSG 620


>UniRef50_P51906 Cluster: Excitatory amino acid transporter 3; n=16;
           Coelomata|Rep: Excitatory amino acid transporter 3 - Mus
           musculus (Mouse)
          Length = 523

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
 Frame = +2

Query: 245 TN*SAQSGLKMLLEYFVHGIIEYDLGSILLVFRTPXXXXXXXXXXXXXXXXEVK----FL 412
           +N S + GL+ ++ YF   +I   LG +L+V   P                EV      L
Sbjct: 84  SNVSGKIGLRAVVYYFSTTVIAVILGIVLVVSIKPGVTQKVNDINRTGKTPEVSTIDAML 143

Query: 413 DRRKTNISESICQRCFHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMA 565
           D  +    E++ Q CF Q +TK    K +   P  N   V   +A +TTM+
Sbjct: 144 DLIRNMFPENLVQACFQQYKTKREEVKPVG-DPGGNATEVSVTTA-MTTMS 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,943,715
Number of Sequences: 1657284
Number of extensions: 9677924
Number of successful extensions: 23456
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23449
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)