Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H02
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.62 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 64  RNNFSIRYWSWNYRGCW 14
           R+NF   +  WNY  CW
Sbjct: 746 RHNFKGLHLDWNYPVCW 762



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/21 (33%), Positives = 8/21 (38%)
 Frame = -3

Query: 76   ELFNRNNFSIRYWSWNYRGCW 14
            +    NNF      W Y  CW
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCW 1950


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 240 FEQIRVLKAGSKCCLNISCME**NMISVLFC 332
           F+QI V+ +  K  LN  C E   +  + FC
Sbjct: 223 FDQIVVILSKVKSILNKKCCEKCGLKKIEFC 253


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 5/15 (33%), Positives = 8/15 (53%)
 Frame = -3

Query: 55  FSIRYWSWNYRGCWH 11
           +++ YW   Y   WH
Sbjct: 117 YAVYYWRQQYEDFWH 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,135
Number of Sequences: 336
Number of extensions: 2525
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)