Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_H02
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.4  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   7.2  
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    23   9.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 DTDTSAEHIVGEPAVKRRFNIKILSRCSSVSV 218
           +  TSA  + G PA + RFN+ +L     VS+
Sbjct: 301 EKSTSAGKVTGTPAQQDRFNVLLLILFLCVSI 332


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 408 SWIVARRTSAKAFAKGVFINQERKLEVRR 494
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 208 EEHRDRILILNRRLTAGSPTIC 143
           +E R   + + RRL  G P++C
Sbjct: 44  QEQRKLAMKVKRRLPGGPPSVC 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,728
Number of Sequences: 2352
Number of extensions: 10222
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)