Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G20
         (129 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    21   7.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            20   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            20   9.4  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    20   9.4  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 56  TIKEKKKKISRLVLSLPR 3
           T++E K+K + +V  LPR
Sbjct: 98  TVEEYKRKWTEIVSMLPR 115


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 60   WYDKRKKKENLETSSLSPS 4
            W D   K ENL TS+ S S
Sbjct: 1611 WIDGHLKVENLITSNESRS 1629


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 60   WYDKRKKKENLETSSLSPS 4
            W D   K ENL TS+ S S
Sbjct: 1612 WIDGHLKVENLITSNESRS 1630


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 119 NVEYFS*NEILCLL 78
           NVEYF  +E  CL+
Sbjct: 157 NVEYFPYDEQTCLM 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,834
Number of Sequences: 2352
Number of extensions: 1228
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 22
effective length of database: 512,235
effective search space used: 10244700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)