Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G20
(129 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 24 0.19
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 1.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 1.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 1.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 2.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 5.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 5.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 5.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 19 5.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 5.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 7.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 7.2
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 18 9.6
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 23.8 bits (49), Expect = 0.19
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 2 HEGERELVSRXXXXXXXXYQVVRTLATDTVFHF 100
H GE +V+ Y ++RT A + + HF
Sbjct: 70 HTGESIVVAPSQTLSNKEYNMLRTTAINVIRHF 102
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 195 LYYFFNLIVP-CVLISSMALLGF 216
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 263 LYYFFNLIVP-CVLISSMALLGF 284
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 1.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C IS+ + F
Sbjct: 263 LYYFFNLIVP-CVLISSMALLGF 284
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYISNRHSISF 99
+++FF+ IVP C I++ + F
Sbjct: 232 LYYFFNLIVP-CVLIASMAVLGF 253
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 71 TLATDTVFHFRKNILH 118
TLA T++ R ++LH
Sbjct: 654 TLAASTLYSKRPDLLH 669
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 71 TLATDTVFHFRKNILH 118
TLA T++ R ++LH
Sbjct: 654 TLAASTLYSKRPDLLH 669
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 71 TLATDTVFHFRKNILH 118
TLA T++ R ++LH
Sbjct: 654 TLAASTLYSKRPDLLH 669
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 119 NVEYFS*NEILCLL 78
NVEYF +E C++
Sbjct: 161 NVEYFPFDEQSCIM 174
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 74 LATDTVFHFRKNILHY 121
LATDT +N HY
Sbjct: 70 LATDTTSENEENYPHY 85
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 105 FLK*NTVSVANVRTTW 58
+L NT+S N RT W
Sbjct: 378 YLYQNTMSNNNQRTEW 393
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 105 FLK*NTVSVANVRTTW 58
+L NT+S N RT W
Sbjct: 416 YLYQNTMSNNNQRTEW 431
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 31 IFFFFSFIVPSCSYI 75
+F FSF++ SYI
Sbjct: 65 LFSVFSFLILVSSYI 79
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,532
Number of Sequences: 438
Number of extensions: 709
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 23
effective length of database: 136,269
effective search space used: 2589111
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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