Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G19
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   8.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.7  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 473 PRNPHPRTGSYRPHPLG 423
           P +P+P+ GS R  P+G
Sbjct: 385 PESPYPQIGSERATPVG 401


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 428 LGRSHRLLCKPGASGS 381
           +G SHR  C  G SGS
Sbjct: 164 IGNSHRCHCSDGYSGS 179


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 268 FPFNDTLLNLSLYSLTHFLLVSI 200
           FP + TLL     S+T ++++SI
Sbjct: 361 FPVDFTLLGFIFGSVTSYIIISI 383


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 341 SLRNLNIDYLDL 376
           SLR LN+DY DL
Sbjct: 491 SLRYLNLDYNDL 502


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 343 RYFEGATDEVRSME 302
           RYFE   DEV  +E
Sbjct: 119 RYFESQKDEVSKVE 132


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 425 GRSHRLLCKPGASG 384
           G  HR  C+PG +G
Sbjct: 49  GVGHRCQCQPGFTG 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,581
Number of Sequences: 336
Number of extensions: 2479
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)