Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G17
(564 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 138 4e-34
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 87 2e-18
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 78 8e-16
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 78 1e-15
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 71 9e-14
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 66 3e-12
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 59 5e-10
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.5
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 27 2.5
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 5.8
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 25 7.7
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.7
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 138 bits (335), Expect = 4e-34
Identities = 63/109 (57%), Positives = 82/109 (75%)
Frame = +1
Query: 94 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVT 273
GFDR IT+FSPEGRLYQVEYA KA N G+TSV + + A V +Q+ VPD+L+D S+V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 274 HLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
H+F +T+ IGCVMTG IAD+R+QV RAR EAA ++YK G +P +L +
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAK 114
Score = 56.0 bits (129), Expect = 4e-09
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2
Query: 404 CTSCAVRIRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
C A R+ +QV TQ A MRPLG +M L+A D+E GPS++K DP+G+Y
Sbjct: 109 CDVLAKRMA-NIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFY 158
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 87.0 bits (206), Expect = 2e-18
Identities = 37/97 (38%), Positives = 64/97 (65%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTH 276
+DR + FSPEGRL+QVEYA++AI G T++ +++ DA V+ ++ + L++ SV
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGVKTKDAVVLGVEKRLTSPLMESHSVEK 66
Query: 277 LFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKY 387
LF + IGC ++G+ AD+R+ ++ AR + N ++ Y
Sbjct: 67 LFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTY 103
Score = 31.9 bits (69), Expect = 0.067
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 413 CAVRIRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
C + +R + + RP G ++++ DE GP +Y ++PSG Y
Sbjct: 117 CDLALRFGEGEDGEERIMSRPFGVALLIAGIDEH-GPQLYHSEPSGTY 163
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 78.2 bits (184), Expect = 8e-16
Identities = 39/103 (37%), Positives = 59/103 (57%)
Frame = +1
Query: 94 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVT 273
G+D + FSP+GRL+Q EYA KA+ T + ++ D ++A ++ V +LL P
Sbjct: 7 GYDLGL-FFSPDGRLFQAEYAYKAVENAS-TCIGIKCEDGVILALEKVVTSKLLKPRVNN 64
Query: 274 HLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIP 402
+ S+ IG TG I D + V+RAR EA +W+ YG+ IP
Sbjct: 65 RIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIP 107
Score = 34.3 bits (75), Expect = 0.013
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 437 FSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
+ Q++T + +RP G + YD E GP +Y +P+G Y
Sbjct: 118 YVQLFTCYSSVRPFGVMSFVATYDSE-GPHLYMVEPNGVY 156
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 77.8 bits (183), Expect = 1e-15
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +1
Query: 88 SAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLD-PS 264
S +D TIFSPEGRLYQVEYAL+AIN G+ ++ + + D V+AA++ V +LL+
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGV-ALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 265 SVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
S L+ + + + C + G+ AD+ + AR + + E+P L R
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVR 112
Score = 34.7 bits (76), Expect = 0.009
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 419 VRIRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYYCS 562
VR Q YTQ +RP G S + +D G +++++PSG Y S
Sbjct: 111 VRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGS 158
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 71.3 bits (167), Expect = 9e-14
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Frame = +1
Query: 91 AGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQR-NVPDRLLDPSS 267
+G+DR +++FSP+GRL QVEY +A+ + G T++ALR ++ V+ +R NVP +L + S+
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRR-GTTAIALRGNECIVIGVERKNVP-KLQNVSN 59
Query: 268 VTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
+ + + G+ AD+R + +AR EA N + + + L R
Sbjct: 60 FQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTR 110
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYD-EESGPSVYKTDPSGYY 556
Q YTQ+ +RP G S ++ +D ++ P VY+T+P+G Y
Sbjct: 117 QKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIY 155
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 66.1 bits (154), Expect = 3e-12
Identities = 36/98 (36%), Positives = 56/98 (57%)
Frame = +1
Query: 109 ITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTHLFSL 288
+T FSP G+L Q+EYAL A+N G+TSV ++++D V+A ++ L +S+ + ++
Sbjct: 9 LTTFSPNGKLVQIEYALNAVN-AGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAI 67
Query: 289 TERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIP 402
T IG V +GM D R V ++R A K E P
Sbjct: 68 TPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYP 105
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
Q TQ+ +RP G S+++ DE+ GPS+Y+ DPSG Y
Sbjct: 119 QESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTY 155
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 58.8 bits (136), Expect = 5e-10
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTH 276
+D T +SP+GRL+QVEYAL+AI QG T + + A +VA +RN + S
Sbjct: 6 YDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL---SSYQKK 62
Query: 277 LFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHIL 414
L + + IG + G+ D+R + EA + + + IPV L
Sbjct: 63 LIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRL 108
Score = 33.9 bits (74), Expect = 0.017
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 440 SQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSG 550
+Q+ TQ RP G ++I YD ESGP + + PSG
Sbjct: 116 AQINTQEYGRRPYGVGFLVIGYD-ESGPHLLEFQPSG 151
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPS 264
FD +IFS + + ++ + G +S++L S +++ A+ P R+ PS
Sbjct: 3749 FDNSQSIFSSSSGVPGLSTKSSSLGKIGSSSISLTLSSSSIRDAELPTPSRMTSPS 3804
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 143 KSNTPLKRLTRVV*HLLHSGVVMLLWWQPNAMSLTVCLIPLQLHTCLASQSV 298
+S TP KRL R V LL V+ +L+W ++ TV ++L+ SV
Sbjct: 433 RSITPEKRLMRRVNGLLAVFVLFMLFWGTCIIAATVPFAIIKLYFAQTYSSV 484
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 552 YPDGSVLYTLGPDSSSYAISIMLQPRGRISAFCVYTWENVKRMR 421
+PD S +Y +GP+ S +Q R RI + ++++N R R
Sbjct: 611 FPDMSEIYDVGPEFEKKQFSEDIQWRKRIDGW-FFSFKNDDRSR 653
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 249 TVRDIALGCHHSSITTPECNRCQTTLVN 166
T++ +ALG HS I+ P T++N
Sbjct: 390 TIQFVALGVFHSKISDPHIGGTYMTILN 417
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.0 bits (52), Expect = 7.7
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = +1
Query: 193 ALRSSDAAVVAAQRNVPDRLLDPSSVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAAN 372
+L + D + + P+ +++ +L+ ++I CV AD Q QR +
Sbjct: 485 SLEACDILCLLYDSSNPNSFSFIANLLNLYPDLQKIPCVFAATKADLDRQQQRYPVQPDE 544
Query: 373 WQYKYGTEIPVHI 411
+ + G P HI
Sbjct: 545 FTKQLGLPSPTHI 557
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,355,116
Number of Sequences: 5004
Number of extensions: 45670
Number of successful extensions: 157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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