Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G17
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 144 3e-35
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 103 7e-23
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 79 2e-15
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 77 1e-14
06_01_0539 + 3869156-3869908 76 2e-14
06_01_0529 + 3831100-3831852 76 2e-14
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 74 7e-14
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 74 9e-14
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 66 2e-11
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 55 5e-08
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 49 3e-06
06_01_0479 + 3419657-3420337 38 0.006
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 31 0.48
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 31 0.48
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 31 0.84
07_03_0503 + 18839863-18841209 30 1.1
12_02_1074 - 25849280-25849324,25849435-25849506,25849601-258496... 28 4.5
12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156 28 4.5
01_01_1208 + 9733010-9733114,9733920-9733979,9735254-9736280,973... 28 4.5
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 28 5.9
12_02_0009 + 12247232-12247380,12249821-12249854,12250861-122510... 27 7.8
09_04_0414 - 17393780-17394826 27 7.8
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 144 bits (350), Expect = 3e-35
Identities = 65/116 (56%), Positives = 89/116 (76%)
Frame = +1
Query: 73 MARESSAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRL 252
M+R + AG+DRHITIFSPEGRLYQVEYA KA+ G+TS+ +R D+ V Q+ VPD+L
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 253 LDPSSVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
LD +SVTHLF +T+ IG + TG+ AD+RS V +AR EAA +++K+G E+PV +L +
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAK 116
Score = 50.8 bits (116), Expect = 7e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 440 SQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
+QVYTQ+A MRPLG M++ YDEE ++K DP+G++
Sbjct: 122 AQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHF 160
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 103 bits (248), Expect = 7e-23
Identities = 48/109 (44%), Positives = 72/109 (66%)
Frame = +1
Query: 97 FDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTH 276
+DR + FSPEGRL+QVEYA++AI G T++ L++ D V+A ++ V LL+PSSV
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKDGVVLAVEKRVTSPLLEPSSVEK 79
Query: 277 LFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCRA 423
+ + E IGC M+G+IAD+R+ V+ AR E N ++ YG + V +A
Sbjct: 80 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA 128
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 470 RPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
RP G S+++ +DE +GPS+Y TDPSG +
Sbjct: 146 RPFGVSLLIAGHDE-NGPSLYYTDPSGTF 173
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 79.0 bits (186), Expect = 2e-15
Identities = 39/104 (37%), Positives = 62/104 (59%)
Frame = +1
Query: 94 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVT 273
G+D +T FSP+GR++QVEYA KA++ G T V ++ D V+ ++ V +++ S
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYAGKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMILKGSNR 65
Query: 274 HLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPV 405
L S+ G + G+ AD R V RA+ EAA+++ YG +PV
Sbjct: 66 RLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPV 109
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 467 MRPLGCSMMLIAYDEESGPSVYKTDPSG 550
+RP GC ++L YD + GP +Y +PSG
Sbjct: 129 LRPFGCGVILGGYDRD-GPQLYMIEPSG 155
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/110 (36%), Positives = 61/110 (55%)
Frame = +1
Query: 91 AGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSV 270
A +DR IT+FSP+G L+QVEYAL+A+ +G +V +R SD V+ ++ +L D SV
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 271 THLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
+ SL I G+ AD+R + RAR E + + + V + R
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITR 110
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDEESG-PSVYKTDPSGYY 556
Q YTQ+ +RP G S +++ +D + P++Y+TDPSG +
Sbjct: 117 QKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTF 155
>06_01_0539 + 3869156-3869908
Length = 250
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +1
Query: 88 SAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPS- 264
S +D TIFSPEGRLYQVEYA++AI G +++ + ++D V+ ++ V +LL S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 265 SVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCRA 423
S ++ + + C + G+++D+ + AR A + Y IPV L ++
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQS 113
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
Q YTQ +RP G S + +D+ G +Y +DPSG Y
Sbjct: 119 QGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNY 156
>06_01_0529 + 3831100-3831852
Length = 250
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Frame = +1
Query: 88 SAGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPS- 264
S +D TIFSPEGRLYQVEYA++AI G +++ + ++D V+ ++ V +LL S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 265 SVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCRA 423
S ++ + + C + G+++D+ + AR A + Y IPV L ++
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQS 113
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
Q YTQ +RP G S + +D+ G +Y +DPSG Y
Sbjct: 119 QGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNY 156
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +1
Query: 91 AGFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSV 270
A +DR IT+FSP+G L+QVEYAL+A+ +G +V +R +D V+ ++ +L D S+
Sbjct: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTVVLGVEKKSTPKLQDSRSM 130
Query: 271 THLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCR 420
+ SL I G+ AD+R + RAR E + + + V + R
Sbjct: 131 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITR 180
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDE-ESGPSVYKTDPSGYY 556
Q YTQ+ +RP G S +++ +D P++Y+TDPSG +
Sbjct: 187 QKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTF 225
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 73.7 bits (173), Expect = 9e-14
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 148 EYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTHLFSLTERIGCVMTGMIA 327
+YA A+ G+TSV +R D+ V R D+L DP+++T+LF++T+RIG + TGM
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPG 143
Query: 328 DSRSQVQRARYEAANWQYKYG 390
D R+ Q AR AA +++K+G
Sbjct: 144 DGRAIAQEARNAAAEFRFKWG 164
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 440 SQVYTQNAEMRPLGCSMMLIAYDEESG-PSVYKTDPSGYY 556
+Q+ TQ+A++RP G M+ DEE G P ++ DP+G +
Sbjct: 180 AQIRTQHAQIRPYGVVSMIFGIDEEKGTPELFTCDPAGQF 219
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 91 AGFDRHITIFSPEGRLYQV 147
A ++R IT+FSPEGRL Q+
Sbjct: 21 ADYERFITLFSPEGRLCQL 39
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Frame = +1
Query: 94 GFDRHITIFSPEGRLYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVT 273
G+D +T FSP+GR++QVEYA KA++ G T V ++ D V+ ++ V +++ S
Sbjct: 7 GYDLSVTTFSPDGRVFQVEYATKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMMLEGSNR 65
Query: 274 HLFSLTERIG--------CVMTGMIADSRSQVQRARYEAANWQYKYGTEIPV 405
+ S+ G + G+ AD R V RA+ EAA+++ YG I V
Sbjct: 66 RIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISV 117
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 467 MRPLGCSMMLIAYDEESGPSVYKTDPSG 550
+RP GC ++L YD + GP +Y +PSG
Sbjct: 137 LRPFGCGVILGGYDRD-GPQLYMIEPSG 163
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Frame = +1
Query: 109 ITIFSPEGRLYQVEYALKAINQG-------GLTSVALRS---------------SDAAVV 222
+T FSP G+L Q+E+AL A+ G G + A+ S ++ V+
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKGRGAANGVVI 69
Query: 223 AAQRNVPDRLLDPSSVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIP 402
A ++ +P L+D +SV + SLT IG V +GM D R V+++R +A + Y IP
Sbjct: 70 ATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIP 129
Query: 403 VHILCR 420
V L R
Sbjct: 130 VTQLVR 135
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 419 VRIRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYYCS 562
VR Q +TQ+ +RP G S+++ YD+ +GP +Y+ DPSG Y S
Sbjct: 134 VRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSGSYFS 180
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 48.8 bits (111), Expect = 3e-06
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 29/129 (22%)
Frame = +1
Query: 121 SPEGRLYQVEYALKAINQG----GLTSVALRSSD-------------------------A 213
SP G+L Q+E+AL A+ G G+ V LRS D
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIKVVRLRSWDLGFRSWPRVDCGSVCAGSSQRVAANG 103
Query: 214 AVVAAQRNVPDRLLDPSSVTHLFSLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGT 393
V+A ++ +P L+D +SV + SLT IG V +GM D R V+++R +A + Y
Sbjct: 104 VVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKE 163
Query: 394 EIPVHILCR 420
IPV L R
Sbjct: 164 TIPVTQLVR 172
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 419 VRIRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYYCS 562
VR Q +TQ+ +RP G S+++ YD+ +GP +Y+ DPSG Y S
Sbjct: 171 VRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSGSYFS 217
>06_01_0479 + 3419657-3420337
Length = 226
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 443 QVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
Q YTQ +RP G S + +D+ G +Y +DPSG Y
Sbjct: 95 QGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNY 132
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 31.5 bits (68), Expect = 0.48
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +1
Query: 121 SPEGR-LYQVEYALKAINQGGLTSVALRSSDAAVVAAQRNVPDRLLDPSSVTH--LFSLT 291
S EGR L ++ AL+ I++G +V S V D LD ++++ L +L
Sbjct: 525 SREGRRLIEIRNALEMIHRG--ENVRFESIFYGGVDIHDRHRDMRLDIDNMSYEELLALE 582
Query: 292 ERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCRAHSLD 435
ERIG V TG+ + +++ + R + ++W+ + E +C+ +D
Sbjct: 583 ERIGNVSTGLSEEEVTKLLKQR-KFSSWRLEASVEEEPCCICQEEYVD 629
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 425 IRLTFSQVYTQNAEMRPLGCSMMLIAYDEESGPSVYKTDPSGYY 556
+ L QV TQ + RP G +++ DE SG +Y PSG Y
Sbjct: 113 VSLMVLQVCTQRSWKRPYGVGLLVAGLDE-SGAHLYYNCPSGNY 155
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 283 SLTERIGCVMTGMIADSRSQVQRARYEAANWQYKYGTEIPVHILCRAHSLD 435
S T IG +++ +RS +RAR+ A Q K TE+ + +L R SL+
Sbjct: 190 SYTSSIGAATINIVSPTRSLDRRARFREAGSQLKTSTEL-LKVLNRIWSLE 239
>07_03_0503 + 18839863-18841209
Length = 448
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 345 ATRAVRGGQLAVQVRHRDPRAHPVPCAFA 431
A+ A R G L V V +R HP+P AFA
Sbjct: 120 ASLAARAGALVVSVEYRLAPEHPLPAAFA 148
>12_02_1074 -
25849280-25849324,25849435-25849506,25849601-25849663,
25849756-25849865,25850648-25850761,25851601-25851681,
25851736-25851850
Length = 199
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = -2
Query: 476 EDASQHSVCTLGRMSSECARHRMCTGISVPYLYCQLAASYRARCTWDLLSAIIPVMTQPI 297
E QH +G + H +C G +Y + A S R C D ++ + PV + I
Sbjct: 51 EGLGQHDFIRIGGFTGMDIAHLICGGCRTLLMYTRNATSVRCSCC-DTVNLVRPVSS--I 107
Query: 296 RSVRLNKCVT 267
+ +C T
Sbjct: 108 AHLNCGQCQT 117
>12_01_0362 - 2746626-2747726,2748358-2748982,2749086-2749156
Length = 598
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 179 PPWLIALRAYSTW*SLPSGE 120
PPWL+ LR+ + SLP GE
Sbjct: 320 PPWLLILRSPCVYQSLPDGE 339
>01_01_1208 +
9733010-9733114,9733920-9733979,9735254-9736280,
9736332-9736621
Length = 493
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 382 CTASWPPRTARVAPGTCYP 326
C SWPP+ APG C P
Sbjct: 351 CPPSWPPQLMVPAPGICTP 369
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 386 YLYCQLAASYRARCTWDLLSAI 321
Y Q+AA+ RCTW+ +SAI
Sbjct: 528 YAELQMAANQGRRCTWEKISAI 549
>12_02_0009 +
12247232-12247380,12249821-12249854,12250861-12251007,
12251095-12251304,12251452-12251787
Length = 291
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 419 RHRMCTGISVPYLYCQLAASYRARC 345
R + + IS+ Y YC LA R+RC
Sbjct: 27 RDHLYSNISLVYFYCLLATPRRSRC 51
>09_04_0414 - 17393780-17394826
Length = 348
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 348 TRAVRGGQLAVQVRHRDPRAHPVPCAF 428
T A + G LAV V +R HP+P A+
Sbjct: 129 TLAAKAGVLAVSVNYRLAPEHPLPAAY 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,454,751
Number of Sequences: 37544
Number of extensions: 348122
Number of successful extensions: 1164
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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