Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G17
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              25   0.40 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   8.6  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 445 LGECQANAHGTGCARGSRCRTCTASWPPRT 356
           + EC+  A G  C    R   C A   PRT
Sbjct: 112 ISECKGIAKGDNCEYAYRFNKCYAELSPRT 141


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 122 ENIVICLSKPALLSRAIFYTNYFTQD 45
           +NI+I ++  ALLS      +YFTQD
Sbjct: 190 QNILIPVNYSALLSHDEQQLSYFTQD 215


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 484 AAQRTHLSILCVHLGECQANAHGTGCARGS 395
           A  R ++ ++  H+   + +AHGTG +R +
Sbjct: 107 AGVRIYVDVIMNHMSGDRNDAHGTGNSRAN 136


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 105 SIETRATFSCHFLYELFYARLPN 37
           ++ T A++  + LYE+F AR PN
Sbjct: 351 ALATEASYD-YSLYEIFPARAPN 372


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 370 NWQYKYGTEIPVHIL 414
           NW Y++   IP HI+
Sbjct: 628 NWVYEWKELIPSHIM 642


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 300 WLRHDWND 323
           WL H+W D
Sbjct: 72  WLEHEWQD 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,147
Number of Sequences: 438
Number of extensions: 3350
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)