Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G16
         (512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    309   4e-86
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.1  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  309 bits (758), Expect = 4e-86
 Identities = 152/154 (98%), Positives = 152/154 (98%)
 Frame = +2

Query: 29  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 208
           QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF
Sbjct: 62  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121

Query: 209 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 388
           AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAK
Sbjct: 122 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK 181

Query: 389 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIPK 490
           IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI K
Sbjct: 182 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 215



 Score =  279 bits (684), Expect = 4e-77
 Identities = 137/139 (98%), Positives = 137/139 (98%)
 Frame = +2

Query: 74  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 253
           MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 254 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 433
           IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120

Query: 434 FAGKQLEDGRTLSDYNIPK 490
           FAGKQLEDGRTLSDYNI K
Sbjct: 121 FAGKQLEDGRTLSDYNIQK 139



 Score =  187 bits (455), Expect = 2e-49
 Identities = 91/91 (100%), Positives = 91/91 (100%)
 Frame = +2

Query: 29  QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 208
           QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF
Sbjct: 138 QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 197

Query: 209 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 301
           AGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 198 AGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 35 LSDYNIQKE 9
          LSDYNIQKE
Sbjct: 56 LSDYNIQKE 64



 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 35  LSDYNIQKE 9
           LSDYNIQKE
Sbjct: 132 LSDYNIQKE 140



 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 35  LSDYNIQKE 9
           LSDYNIQKE
Sbjct: 208 LSDYNIQKE 216


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -2

Query: 247 IRKSTTVFQLLAGEDKTLLIW 185
           ++   TVFQ+L GED  ++++
Sbjct: 655 VQSLLTVFQILTGEDWNMVMY 675


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 170 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 292
           K   P  Q R IF G+ +++   +    +Q++   HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,250
Number of Sequences: 2352
Number of extensions: 9893
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)