Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G15
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.6  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.7  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 42  RCVRQSRIDIK 74
           RCVR  RIDIK
Sbjct: 164 RCVRMQRIDIK 174


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 79  LALISIRLCRTHRHSRH 29
           L  + + LCR   HSRH
Sbjct: 726 LKYLGVDLCRKQHHSRH 742


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 6   TRNKTKKVWRLCRCV 50
           T N T  VW  C+CV
Sbjct: 184 TPNATNTVWSHCQCV 198


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 6   TRNKTKKVWRLCRCV 50
           T N T  VW  C+CV
Sbjct: 184 TPNATNTVWSHCQCV 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,907
Number of Sequences: 2352
Number of extensions: 11366
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)