Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G14
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein. 50 1e-06
AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cel... 50 1e-06
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 30 1.3
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 30 1.3
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 6.9
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 27 9.1
>AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein.
Length = 173
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 134 KPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 274
KP++E+KRRARIN+ L +LK++++ +K EKADILE+ V
Sbjct: 26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAV 72
>AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cell
lineage protein 22 protein.
Length = 173
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 134 KPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 274
KP++E+KRRARIN+ L +LK++++ +K EKADILE+ V
Sbjct: 26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAV 72
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 110 TYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 274
T R+ +K E+ RR + + C ELK +++ E KLE+ ILE+ +
Sbjct: 142 TESERRKVKTEREKIRRKKQDDCYAELKFFILNKQMGSYEQRLKLERITILEIII 196
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 110 TYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADILELTV 274
T R+ +K E+ RR + + C ELK +++ E KLE+ ILE+ +
Sbjct: 134 TESERRKVKTEREKIRRKKQDDCYAELKFFILNKQMGSYEQRLKLERITILEIII 188
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 226 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 280
Query: 263 E 265
+
Sbjct: 281 K 281
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 89 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 143
Query: 263 E 265
+
Sbjct: 144 K 144
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 226 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 280
Query: 263 E 265
+
Sbjct: 281 K 281
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 201 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 255
Query: 263 E 265
+
Sbjct: 256 K 256
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 192 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 246
Query: 263 E 265
+
Sbjct: 247 K 247
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 167 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 221
Query: 263 E 265
+
Sbjct: 222 K 222
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 252 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 306
Query: 263 E 265
+
Sbjct: 307 K 307
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +2
Query: 83 DDGPQPVSRTYQYRKVMKPMLERKRRARINRCLDELKELMVSALQSEGENVAKLEKADIL 262
D+ P+ R + +K + M+ER+RR IN D +KEL ++ E++ KL K IL
Sbjct: 227 DNDPEDYYRDRR-KKDIHNMIERRRRYNIN---DRIKELGQMLPKNTSEDM-KLNKGTIL 281
Query: 263 E 265
+
Sbjct: 282 K 282
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 80 ADDGPQPVSRTYQYRKVMK-PMLERKRRA 163
A+DG +P+S+T Q RK+ K +ERK RA
Sbjct: 50 AEDGDKPMSKT-QKRKLKKAAAIERKERA 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,124,200
Number of Sequences: 27780
Number of extensions: 238835
Number of successful extensions: 703
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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