Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G11
(534 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.58
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.58
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.58
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.58
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.58
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 29 0.58
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.58
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.58
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.58
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.58
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.58
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.58
SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.8
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 27 1.8
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 26 3.1
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 25 7.1
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.1
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 25 7.1
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 25 7.1
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.1
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 9.4
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 9.4
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 25 9.4
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 25 9.4
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 9.4
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 28.7 bits (61), Expect = 0.58
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 185 IFPYKRCSLKHIIYEFMSILDLLSYFHTRFLF-IYRYSD 72
I + R + K + +F + DLL++FH+ FLF Y +SD
Sbjct: 507 ILSFLRSTYKVLKNDFQ-VFDLLNFFHSTFLFQNYEFSD 544
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.7 bits (61), Expect = 0.58
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 KYIGSNIAERLFCGAKESTSKILRKKVLKRWPPLER--RSIEYIRKNI 450
K+IG +I+E+ F +E+ K+L+ K K L + S+ Y+RK I
Sbjct: 609 KFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFI 656
>SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 522 LTGPVVVFFFRDSHTLFGQCHVGKDI 445
+T P V+F+ + + ++ HVGKD+
Sbjct: 120 ITVPPVIFYDKSTRQVYAIAHVGKDV 145
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 125 DLLSYFHTRFLFIYRYSDGYRVKDIYRSRIYNTII 21
D L +F RF +Y Y D +K R YN++I
Sbjct: 456 DYLIFFEERFYSLYSYLDSRGLKYEEVQRYYNSLI 490
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 210 WSNINFFFNFSLQKMF 163
WS I FFN+ L+K+F
Sbjct: 696 WSGIGLFFNYYLKKIF 711
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 140 FMSILDLLSYFHTRFLFIYRYSDGYRVKDIYR 45
F S LD L YF +RFL S YR++ YR
Sbjct: 261 FHSFLDSLKYFLSRFL-----STDYRIQLTYR 287
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 68 IHHCSDK*IKT*YENTIINLKLT*IHKLYALMN 166
+HH + +K+ E INL+ + +H +Y+L+N
Sbjct: 477 LHHSKAR-LKSELEKAPINLRSSCLHAIYSLVN 508
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 280 YVIVCTFGIIHKYIGSNIAERLFCGAKE 363
++ +C FG+ + +N FCG E
Sbjct: 441 HIALCDFGLSKANLSANATTNTFCGTTE 468
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 436 YIQYFYVPKEAIF*ELSSLESSRYFLWHHRIN 341
Y+Q+FY+ ++ E SS+E + W +N
Sbjct: 12 YVQWFYLSNYDLYDETSSMELTGAQSWRRFLN 43
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 241 FHMVVFIN*FMFLYVIVCTFGIIH 312
FH++ FIN F+ + I+ + + H
Sbjct: 149 FHLIPFINFFLLYHQIILSHSLFH 172
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +1
Query: 382 RKKVLKRWPPLERRSIEYIRKNIFTHMTLAE*CM*VTEKKDYD 510
+K V+ W P+ + + + N+F + +E + +T++ D D
Sbjct: 225 KKIVVAEWSPIGHKLVYGLGSNLFIWESFSEPPVCITDQSDLD 267
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 312 MDNTKSTYYDI*KHKLINKNYHMKDLSPANIPEQWSNINF 193
+ NT +TYY +++LI +++ N+PE W+ +NF
Sbjct: 556 LTNTLTTYYSS-RYRLILTGTPLQN----NLPELWALLNF 590
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 458 WVKIFFRIYSILLRSKGGHLLRTFFLRIFEVLSLAPQNKRSAM 330
++ IY + +L T +RIF LS APQ A+
Sbjct: 760 FISQLIHIYKDNMMEITNRMLPTLLMRIFSSLSAAPQGTDDAV 802
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 340 RLFCGAKESTSKILRKKVLKRWPPLERR--SIEYIRKNIF 453
R+FC A++ L + + P ERR S+E +++ F
Sbjct: 357 RVFCLAEQLADAALNTNIENMYNPTERRSESVELLKRESF 396
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 449 IFFRIYSILLRSKGGHLLRTF 387
IF+RI+ ILL K G LL F
Sbjct: 931 IFYRIHEILLDPKLGQLLLLF 951
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,182,822
Number of Sequences: 5004
Number of extensions: 45315
Number of successful extensions: 132
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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