Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G09
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    29   0.041
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      25   0.50 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 0.041
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = -2

Query: 596 QPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHPSVVS 417
           +P  PA  P+   K   V+ + +R       ++MP ++ W  P    + P+ NS+P++V+
Sbjct: 39  RPLIPATAPQKPDKWEDVMADIER-------VIMPGVTHWHSPRFHAYFPTANSYPAIVA 91


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 381 RCNKGCELQGSRWWQSHQSCRKSHQGQEVASTVN 280
           RC    ++ GS+ WQ  +SC    +  E  ++V+
Sbjct: 68  RCASYIQVSGSKIWQMERSCMCCQESGEREASVS 101


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -1

Query: 189 FYMAYTVTLFLIYIRLYIHLKCFVI 115
           FY  + +  F +Y+  +++   FV+
Sbjct: 144 FYKQFAIEYFQMYVLFFVNFAFFVV 168


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -1

Query: 189 FYMAYTVTLFLIYIRLYIHLKCFVI 115
           FY  + +  F +Y+  +++   FV+
Sbjct: 144 FYKQFAIEYFQMYVLFFVNFAFFVV 168


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 441  PGRTPHTGAWREP 479
            PG  P T +W++P
Sbjct: 1157 PGHKPSTSSWQKP 1169


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 400 LMXTHGETTEGWEFLEGLHTQG 465
           L+ T G   EG+   E LH +G
Sbjct: 34  LLVTEGWDEEGYHTPESLHYEG 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,674
Number of Sequences: 336
Number of extensions: 3403
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)