Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G09
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 120 1e-27
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 120 1e-27
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 120 1e-27
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 36 0.023
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.65
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 2.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 2.6
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 2.6
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 2.6
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 2.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 4.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 4.6
AC024806-2|AAK84613.1| 433|Caenorhabditis elegans Hypothetical ... 28 4.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 4.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 6.0
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 120 bits (288), Expect = 1e-27
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = -1
Query: 612 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 433
VLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++
Sbjct: 326 VLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYA 385
Query: 432 PLGRFAVR 409
PLGRFAVR
Sbjct: 386 PLGRFAVR 393
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 120 bits (288), Expect = 1e-27
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = -1
Query: 612 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 433
VLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++
Sbjct: 360 VLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYA 419
Query: 432 PLGRFAVR 409
PLGRFAVR
Sbjct: 420 PLGRFAVR 427
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 120 bits (288), Expect = 1e-27
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = -1
Query: 612 VLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFP 433
VLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++
Sbjct: 360 VLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYA 419
Query: 432 PLGRFAVR 409
PLGRFAVR
Sbjct: 420 PLGRFAVR 427
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -1
Query: 555 VDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 409
+D++TG+ + K +K + I+ L +P +E F+E+P LGRF +R
Sbjct: 470 IDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLR 516
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -1
Query: 609 LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 430
L H+ + C F + +++ G+ + P+ I G +A+V + + +E+F
Sbjct: 508 LYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRA 567
Query: 429 LGRFAVR 409
LGR R
Sbjct: 568 LGRVTFR 574
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = -1
Query: 609 LDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 430
L H+ + C F + +++ G+ + P+ I G +A+V + + +E+F
Sbjct: 526 LYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRA 585
Query: 429 LGRFAVR 409
LGR R
Sbjct: 586 LGRVTFR 592
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 31.1 bits (67), Expect = 0.65
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 351 SRWWQSHQSCRKSHQGQEVASTVNSSVLYTTAILHSPKGVQKERRATN 208
SR+ H S S G EV S +SS+ +T L+S K ++ RRA N
Sbjct: 3717 SRFLNMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRARRAMN 3764
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 607 GLPHSPHSLQICRNQRESRPSYW*INR 527
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 548 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 429
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 548 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 429
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 575 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 450
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 493 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 551
Query: 195 Y 193
Y
Sbjct: 552 Y 552
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 707 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 765
Query: 195 Y 193
Y
Sbjct: 766 Y 766
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 843 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 901
Query: 195 Y 193
Y
Sbjct: 902 Y 902
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 195 Y 193
Y
Sbjct: 951 Y 951
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 892 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 950
Query: 195 Y 193
Y
Sbjct: 951 Y 951
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 884 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 942
Query: 195 Y 193
Y
Sbjct: 943 Y 943
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 895 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 953
Query: 195 Y 193
Y
Sbjct: 954 Y 954
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 369 GCELQGSRWWQSHQSCRKS--HQGQEVASTVNSSVLYTTAILHSPKGVQKERRATNSFLF 196
GCE++ ++ H +CR S H+ AS +S V L +P +K+R T+ L
Sbjct: 896 GCEIESRNFFPDHANCRHSCAHKYATPAS-FSSKVYIPPGELSTPVPPRKDRLTTSLKLT 954
Query: 195 Y 193
Y
Sbjct: 955 Y 955
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 609 LDCHTAHIACKFAEIKEKVDRRTGKSTE 526
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 609 LDCHTAHIACKFAEIKEKVDRRTGKSTE 526
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AC024806-2|AAK84613.1| 433|Caenorhabditis elegans Hypothetical
protein Y52E8A.4 protein.
Length = 433
Score = 28.3 bits (60), Expect = 4.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 175 YCNIIFNLYKVIHTPQMFCY 116
+C N +K++ TP+MFC+
Sbjct: 211 FCETFVNSFKLLKTPRMFCF 230
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 609 LDCHTAHIACKFAEIKEKVDRRTGKSTE 526
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -2
Query: 497 MPPLSTWFPPSPCVWSPSRNSHPSVVSPCVXMRQKTVAVGVIKAV 363
+PP+S+ PP P P H + +P + K ++ +K+V
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSV 844
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -2
Query: 497 MPPLSTWFPPSPCVWSPSRNSHPSVVSPCVXMRQKTVAVGVIKAV 363
+PP+S+ PP P P H + +P + K ++ +K+V
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMHVAASAPVLMSNSKGISADALKSV 844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,905,815
Number of Sequences: 27780
Number of extensions: 311195
Number of successful extensions: 941
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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