Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G08
         (505 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000218-1|AAH00218.1|  618|Homo sapiens delta-like 3 (Drosophil...    30   5.3  
AK075302-1|BAC11535.1|  587|Homo sapiens protein ( Homo sapiens ...    30   5.3  
AF241373-1|AAF62542.1|  618|Homo sapiens DLL3 protein precursor ...    30   5.3  
X91156-1|CAA62593.1|  573|Homo sapiens antimullerian hormone typ...    29   9.2  
X89013-1|CAA61418.1|  573|Homo sapiens anti-mullerian hormone ty...    29   9.2  
U29700-1|AAC50328.1|  573|Homo sapiens anti-mullerian hormone ty...    29   9.2  
BC126316-1|AAI26317.1|  573|Homo sapiens anti-Mullerian hormone ...    29   9.2  
AY714878-1|AAU21221.1|  478|Homo sapiens anti-Mullerian hormone ...    29   9.2  
AF172932-1|AAD48497.1|  573|Homo sapiens MIS type II receptor pr...    29   9.2  

>BC000218-1|AAH00218.1|  618|Homo sapiens delta-like 3 (Drosophila)
           protein.
          Length = 618

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 24  PSRCG*GCPGL-RPRRCPSRCASGSRPRKP 110
           P   G  C  L RPR  PSRC  G RP  P
Sbjct: 180 PPAVGTACTRLCRPRSAPSRCGPGLRPCAP 209


>AK075302-1|BAC11535.1|  587|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90821 fis, clone Y79AA1001328, highly similar to
           Delta-like protein 3 precursor. ).
          Length = 587

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 24  PSRCG*GCPGL-RPRRCPSRCASGSRPRKP 110
           P   G  C  L RPR  PSRC  G RP  P
Sbjct: 180 PPAVGTACTRLCRPRSAPSRCGPGLRPCAP 209


>AF241373-1|AAF62542.1|  618|Homo sapiens DLL3 protein precursor
           protein.
          Length = 618

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 24  PSRCG*GCPGL-RPRRCPSRCASGSRPRKP 110
           P   G  C  L RPR  PSRC  G RP  P
Sbjct: 180 PPAVGTACTRLCRPRSAPSRCGPGLRPCAP 209


>X91156-1|CAA62593.1|  573|Homo sapiens antimullerian hormone type
           II receptor protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 514 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 561


>X89013-1|CAA61418.1|  573|Homo sapiens anti-mullerian hormone type
           II receptor protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 514 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 561


>U29700-1|AAC50328.1|  573|Homo sapiens anti-mullerian hormone type
           II receptor precursor protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 514 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 561


>BC126316-1|AAI26317.1|  573|Homo sapiens anti-Mullerian hormone
           receptor, type II protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 514 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 561


>AY714878-1|AAU21221.1|  478|Homo sapiens anti-Mullerian hormone
           receptor type II protein.
          Length = 478

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 419 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 466


>AF172932-1|AAD48497.1|  573|Homo sapiens MIS type II receptor
           protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 12  SSTMPSRCG*GCPGLRPRRCPSRCASGSRPRKPPRQINQLHTYIQHNLCT 161
           S   P  C  GCP L P  C S  A    P +P R  +  H  +Q   C+
Sbjct: 514 SHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQR--SACHFSVQQGPCS 561


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,371,070
Number of Sequences: 237096
Number of extensions: 1280294
Number of successful extensions: 2611
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2602
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)