Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G08
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.3  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   9.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 413 IYYLHCRSLVERRSDVTNVLAHV 345
           I YLH + LV R   + NVL  +
Sbjct: 710 IRYLHSQGLVHRDVKLKNVLLDI 732


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 413 IYYLHCRSLVERRSDVTNVLAHV 345
           I YLH + LV R   + NVL  +
Sbjct: 748 IRYLHSQGLVHRDVKLKNVLLDI 770


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 99  PRKPPRQINQLHTYIQHNLCTAATCHVNL*RRYYLVTSHRLMYVH*K 239
           PR     IN     +Q  +   A  H      Y  ++SH L YV+ K
Sbjct: 232 PRYTKYTINDESFSLQDGILGMALSHKTQNLYYSAMSSHNLNYVNTK 278


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 371 HCVSLPGNDNVDN 409
           HCV+   NDN+ N
Sbjct: 413 HCVNNNQNDNIQN 425


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 292 HL*RHTSPSKYYCKH 336
           H+  HT    Y+C H
Sbjct: 28  HMRLHTGEKPYHCSH 42


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 437 CVCVLFTHIYYLHC 396
           C+ +L   +YY+ C
Sbjct: 178 CISILAIKVYYISC 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,098
Number of Sequences: 438
Number of extensions: 2410
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)