Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G07
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003359-1|AAH03359.1|  306|Homo sapiens chromosome 20 open read...    61   2e-09
AL109806-3|CAC03740.1|  306|Homo sapiens chromosome 20 open read...    61   2e-09
AL109806-2|CAM27632.1|  230|Homo sapiens chromosome 20 open read...    61   2e-09
AL109806-1|CAM27631.1|  277|Homo sapiens chromosome 20 open read...    61   2e-09
AK000481-1|BAA91193.1|  306|Homo sapiens protein ( Homo sapiens ...    61   2e-09
AF212244-1|AAK14929.1|  306|Homo sapiens CDA05 protein.                61   2e-09
AF117231-1|AAF17212.1|  306|Homo sapiens protein x 0001 protein.       61   2e-09
BC011249-1|AAH11249.1|  301|Homo sapiens nitric oxide synthase i...    31   2.3  
BC010077-1|AAH10077.1|  301|Homo sapiens nitric oxide synthase i...    31   2.3  
BC009299-1|AAH09299.1|  301|Homo sapiens nitric oxide synthase i...    31   2.3  
AF132959-1|AAD27734.1|  301|Homo sapiens CGI-25 protein protein.       31   2.3  
BC092513-1|AAH92513.1|  890|Homo sapiens WD repeat domain 81 pro...    30   3.9  
AL834379-1|CAD39042.1|  909|Homo sapiens hypothetical protein pr...    30   3.9  
AK091136-1|BAC03593.1|  890|Homo sapiens protein ( Homo sapiens ...    30   3.9  
AK074111-1|BAB84937.1|  938|Homo sapiens FLJ00182 protein protein.     30   3.9  

>BC003359-1|AAH03359.1|  306|Homo sapiens chromosome 20 open reading
           frame 43 protein.
          Length = 306

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>AL109806-3|CAC03740.1|  306|Homo sapiens chromosome 20 open reading
           frame 43 protein.
          Length = 306

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>AL109806-2|CAM27632.1|  230|Homo sapiens chromosome 20 open reading
           frame 43 protein.
          Length = 230

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>AL109806-1|CAM27631.1|  277|Homo sapiens chromosome 20 open reading
           frame 43 protein.
          Length = 277

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 58  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 117

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 118 VTELKLSDN 126


>AK000481-1|BAA91193.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20474 fis, clone KAT07183. ).
          Length = 306

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>AF212244-1|AAK14929.1|  306|Homo sapiens CDA05 protein.
          Length = 306

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>AF117231-1|AAF17212.1|  306|Homo sapiens protein x 0001 protein.
          Length = 306

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = +3

Query: 9   AERSFKWRNCALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKP---DCISHIKNLK- 176
           AE   +W  C LSQ+ L+ P+V+C LGRLY+K +V+E LLDK  +       SHIK++K 
Sbjct: 28  AELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKN 87

Query: 177 VTLLKKSLN 203
           VT LK S N
Sbjct: 88  VTELKLSDN 96


>BC011249-1|AAH11249.1|  301|Homo sapiens nitric oxide synthase
           interacting protein protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 36  CALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERK 143
           C LS QP  +PVV+   G LY + ++LE +L ++++
Sbjct: 46  CCLSLQPCHDPVVTPD-GYLYEREAILEYILHQKKE 80


>BC010077-1|AAH10077.1|  301|Homo sapiens nitric oxide synthase
           interacting protein protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 36  CALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERK 143
           C LS QP  +PVV+   G LY + ++LE +L ++++
Sbjct: 46  CCLSLQPCHDPVVTPD-GYLYEREAILEYILHQKKE 80


>BC009299-1|AAH09299.1|  301|Homo sapiens nitric oxide synthase
           interacting protein protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 36  CALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERK 143
           C LS QP  +PVV+   G LY + ++LE +L ++++
Sbjct: 46  CCLSLQPCHDPVVTPD-GYLYEREAILEYILHQKKE 80


>AF132959-1|AAD27734.1|  301|Homo sapiens CGI-25 protein protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 36  CALSQQPLQEPVVSCGLGRLYSKSSVLEALLDKERK 143
           C LS QP  +PVV+   G LY + ++LE +L ++++
Sbjct: 46  CCLSLQPCHDPVVTPD-GYLYEREAILEYILHQKKE 80


>BC092513-1|AAH92513.1|  890|Homo sapiens WD repeat domain 81
           protein.
          Length = 890

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  SQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKPD 149
           S QP +   VS  LGRL  KSS  E  L +ER PD
Sbjct: 43  SPQPQEAEAVS--LGRLSDKSSTSETSLGEERAPD 75


>AL834379-1|CAD39042.1|  909|Homo sapiens hypothetical protein
           protein.
          Length = 909

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  SQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKPD 149
           S QP +   VS  LGRL  KSS  E  L +ER PD
Sbjct: 62  SPQPQEAEAVS--LGRLSDKSSTSETSLGEERAPD 94


>AK091136-1|BAC03593.1|  890|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33817 fis, clone CTONG2003028. ).
          Length = 890

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  SQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKPD 149
           S QP +   VS  LGRL  KSS  E  L +ER PD
Sbjct: 43  SPQPQEAEAVS--LGRLSDKSSTSETSLGEERAPD 75


>AK074111-1|BAB84937.1|  938|Homo sapiens FLJ00182 protein protein.
          Length = 938

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  SQQPLQEPVVSCGLGRLYSKSSVLEALLDKERKPD 149
           S QP +   VS  LGRL  KSS  E  L +ER PD
Sbjct: 221 SPQPQEAEAVS--LGRLSDKSSTSETSLGEERAPD 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,424,634
Number of Sequences: 237096
Number of extensions: 1254708
Number of successful extensions: 2177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)