Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G06
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 228 1e-59
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 228 1e-59
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 228 1e-59
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 228 1e-59
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 228 1e-59
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 225 9e-59
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 56 1e-07
BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40 ... 30 5.4
BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40 ... 30 5.4
BC111061-1|AAI11062.1| 280|Homo sapiens CDC40 protein protein. 30 5.4
AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40 ... 30 5.4
AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40 ... 30 5.4
AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40 ... 30 5.4
AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing facto... 30 5.4
AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17 ... 30 5.4
AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing facto... 30 5.4
AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing facto... 30 5.4
AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens ... 29 9.4
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 228 bits (558), Expect = 1e-59
Identities = 112/184 (60%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 225 bits (550), Expect = 9e-59
Identities = 111/184 (60%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Frame = +3
Query: 45 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 224
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 225 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRARLI 404
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR++LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 405 LFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGA 581
LFP K KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR A
Sbjct: 126 LFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMA 185
Query: 582 RSIA 593
R+ A
Sbjct: 186 RANA 189
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 55.6 bits (128), Expect = 1e-07
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 459 KLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIA 593
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANA 46
>BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>BC111061-1|AAI11062.1| 280|Homo sapiens CDC40 protein protein.
Length = 280
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17
protein.
Length = 542
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 97 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 155
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 156 LGPWAKYVDEKDVAKPSREEQK 177
>AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing factor
protein.
Length = 579
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 134 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 192
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 193 LGPWAKYVDEKDVAKPSEEEQK 214
>AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 501
Score = 30.3 bits (65), Expect = 5.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 306 TIGIAVDPRRRNKSVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGP 485
T G A+DP N V + I E L +F G+K + +E A+ + G
Sbjct: 133 TYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKEND-ASNIDGF 191
Query: 486 LMP-VQQTAPKSVARPITEDEK 548
L P + K VA+P E++K
Sbjct: 192 LGPWAKYVDEKDVAKPSEEEQK 213
>AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ32693 fis, clone TESTI2000253, weakly similar to
Homo sapiens A1U mRNA. ).
Length = 260
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 345 SVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVA 524
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 167 ALPSIELTQQLQEEYKGATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 226
Query: 525 R 527
+
Sbjct: 227 Q 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,873,321
Number of Sequences: 237096
Number of extensions: 1586576
Number of successful extensions: 6858
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6843
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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