Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G03
(568 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr... 30 0.21
SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase |Schizosacch... 29 0.36
SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces pomb... 29 0.63
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 27 1.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 1.9
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 1.9
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 3.4
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 26 3.4
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 26 3.4
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 26 4.4
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 25 5.9
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 5.9
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 25 5.9
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 25 7.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 7.7
>SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 279
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 374 IDTAREIANIYNKNRNEVVENVPAL 448
++TAREIANI +K+ N+V+ N L
Sbjct: 249 LETAREIANILSKSNNKVMLNASTL 273
>SPBC16C6.01c ||SPBC543.11c|lysine methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 29.5 bits (63), Expect = 0.36
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 254 DLTGSPLKLDLSLHTILDETFASDEPQMWNKEEVLHGPISIDTAREIANIYNKNRNEVV 430
++T SP L+ LDET D P +W + L G +D +Y +++V
Sbjct: 106 NITDSPWNAYLNT---LDETCMPDSPLLWKDKTCLEGTSMLDVINTNLRVYKNQYDQLV 161
>SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 28.7 bits (61), Expect = 0.63
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +2
Query: 308 ETFASDEPQMWNKEEVLHGPISIDTAREIANIYNKNRNEVVENVPAL 448
E A + + WN+ E P+ ++ + + + +E++EN P +
Sbjct: 276 EDDAQSDARSWNEYEAQGEPVPVEQVTHLQDDVQSDTSEIIENEPGM 322
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 360 CNTSSLFHICGSSDAKVSSRMVCRLRSNLRGEPVRSNSWTSLLSFTQVS 214
C+ +S F+I ++ K S +VC S L G+PV S++S +S
Sbjct: 1175 CSIASFFNIVSANILK-SKLIVCEADSTLFGDPVLRTLPDSVISLPGIS 1222
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 279 NLRGEPVRSNSWTSLLSFTQVSG*LVECLTLEYTITISSLHFVY 148
++ G P+ ++ WTS+ S+T+ L C +E T+ F Y
Sbjct: 2076 SIAGNPIFNDIWTSIASWTERR--LQSCSQIEVTLPCVECFFKY 2117
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 173 QYHHYILYTFRHNLDIFVSQYNICHNFLILVVIKD 69
++ + ILYT H IF S +NI +F + ++++
Sbjct: 262 KFENEILYTAMHTTSIFKSVFNILGSFYTMRLLRN 296
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 3.4
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Frame = -2
Query: 561 SKIIAPS*VTIPLEK*DLSGLTINNNGLDISAGFTSIHKAGTFSTTSFLFXXXXXXXXXX 382
S + PS TIP +S T ++ L IS+ S T ++T L
Sbjct: 535 SSLSTPS-TTIPTSNSSVSLQT--SSSLIISSPIISSSLTATSTSTPALTHSITPSNTSY 591
Query: 381 XXXXIGPCNT---SSLFHICGSSDAKVSSRMVCRLRSNLRGEPVRSNSWTSLLSFT 223
I +T SSL +C + +++SS + L S L + + SN + + T
Sbjct: 592 TSSLIPSSSTDYSSSLITVCSNVTSEISSTSLASLISTLTSQQISSNKSSEFVGQT 647
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 62 KMNPLLPPGLENYGKYYIEKQKCPSYVEMYTKC 160
K+NPL P YG +E QK + +E +++C
Sbjct: 549 KINPLSYPTWFTYGCAALELQKYDAAMEAFSRC 581
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 227 KDNKEVQELDLTGSPLKLDLSLHTILDETFASDEPQMWNKE 349
K+NK++ E + +K +L T+ FA+DE ++W +E
Sbjct: 61 KENKKIWEFFKGSNKIK---NLFTMFTCCFANDEEEIWGEE 98
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 4.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 224 VKDNKEVQELDLTGSPLKLDLSLHTILD-ETFASDE--PQMWNKEEVLHGP 367
+KD + L LT S +K+D+ +++L E ASDE + + K+ + H P
Sbjct: 10 IKDECQFSLLPLTYSFIKMDIDPYSVLGVEKDASDELIRRAYRKKALQHHP 60
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 323 DEPQMWNKEEVLHGPISIDTAREIANIYNKNRNEVVENVPALWILVKPADI 475
D+P ++EEVL P E + N N E+ + A+ L+K A++
Sbjct: 605 DDPTYSDEEEVLFAPPGDLQLSESIDELNNNIEELKAQLNAINTLIKKAEL 655
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 197 HSTSYPETCVKDNKEVQELDLTGSPLKLDLSLHTIL 304
HS YP+ C+ + K ++EL + S + + T+L
Sbjct: 1141 HSDIYPKICISNFKALRELSFSISEFGKENATFTLL 1176
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 409 IVYIGYFSCCVNTDWTM*HFFLIPH--LWFIRCKGFIQNGMQAEIQFKRRTSQ 257
+ +IG+ SC V +D + F + PH +F+ + G+ +FK T++
Sbjct: 116 VPHIGWNSCAVRSDTSKEFFGMRPHDKFYFVHSYMIPEKGLILPPEFKIATTK 168
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 294 CRLRSNLRGEPVRSNSWTSLLSFTQVSG*LVECLTLEY 181
CR LRG+PV+ WT S + + LV + Y
Sbjct: 105 CRNILALRGDPVKDTDWTEGESGFRYASDLVRYIRTHY 142
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.0 bits (52), Expect = 7.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 172 NIITTFCIHFDIT 134
N+ T FC++FDIT
Sbjct: 870 NVFTKFCLNFDIT 882
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,506,846
Number of Sequences: 5004
Number of extensions: 53837
Number of successful extensions: 200
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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