Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_G03
(568 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 27 0.13
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 26 0.30
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.40
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 25 0.53
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 2.1
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 4.9
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 21 6.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 6.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 6.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 6.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.5
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 21 6.5
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 6.5
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 27.1 bits (57), Expect = 0.13
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 524 LKSEIYLVLPSIIMA*IYLQVLPVSTRQEHFPQLHSCFYCIYWLFLLL 381
LK +I + + + +VL +ST+ QLHSCF + L+ ++
Sbjct: 17 LKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVM 64
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 469 CRFYQYPQGRNIFHNFIPVFIVY 401
CRF+ P GR I+HN F+V+
Sbjct: 200 CRFW--PTGRGIYHNDDKTFLVW 220
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.4 bits (53), Expect = 0.40
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 239 EVQELDLTGSPL--KLDLSLHTILDETFASDEPQMW 340
E + L PL L+LSLH L+ T D+P+ +
Sbjct: 237 ESANISLDEPPLGKNLNLSLHASLNHTLTKDQPETY 272
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 25.0 bits (52), Expect = 0.53
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 395 ANIYNKNRNEVVEN--VPALWILVKPADISKPLLLMVRPDKSHFSRGIVTYE 544
A + + N N V N VP L L K + + L+ PDKS G++ +E
Sbjct: 94 ALLKDPNGNVVARNGGVPQLGNLTKHLQVFRDHLINQIPDKSFPGVGVIDFE 145
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 291 RLRSNLRGEPVRSNSWTSLLSFTQVSG*LVECLTLEYTITI 169
RLR N GEP+ ++ SF +S + ++YTIT+
Sbjct: 51 RLRPNFGGEPLLVGMDLTIASFDAISE-----VNMDYTITM 86
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 319 CKGFIQNGMQAEIQFK 272
CKGF + +Q +IQ++
Sbjct: 87 CKGFFRRSIQQKIQYR 102
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 2.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 185 SKVKHSTSYPETCVKDNKEVQELDLTGSPLKLDLSLHTILDETFASDEPQMWNKEEVLHG 364
+++K + PET D +EVQ D + K L L ++ E ++ +LHG
Sbjct: 137 AEIKTESIQPETTKVDTREVQPHDASE---KEQLGLASVKAEPGSTGTTTTSTGTRLLHG 193
Query: 365 PIS 373
+S
Sbjct: 194 ILS 196
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 4.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1
Query: 463 FYQYPQGRNIFHNFIPVFIVYIGYFSCCVN 374
+YQYP ++H + I +G+ S N
Sbjct: 41 WYQYPPLNPMWHGILGFVIGMLGFVSAMGN 70
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 302 LDETFASDEPQMWN 343
L E F ++EP+ WN
Sbjct: 89 LAEWFTTNEPEKWN 102
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 434 FPQLHSCFYCIYWLFLL 384
FP CF +YW+ L
Sbjct: 412 FPVCFVCFNLMYWIIYL 428
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -3
Query: 434 FPQLHSCFYCIYWLFLL 384
FP CF +YW+ L
Sbjct: 412 FPVCFVCFNLMYWIIYL 428
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 226 KRQQRSPRVRSDW 264
KR++ S RV+ DW
Sbjct: 494 KREEDSTRVKEDW 506
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -1
Query: 463 FYQYPQGRNIFHNFIPVFIVYIGYFSCCVN 374
+YQYP ++H + I +G+ S N
Sbjct: 7 WYQYPPLNPMWHGILGFVIGMLGFVSVMGN 36
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 279 NLRGEPVRSNSW 244
N+RG P+++ SW
Sbjct: 330 NVRGNPIKTVSW 341
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 302 LDETFASDEPQMWN 343
L E F ++EP+ WN
Sbjct: 89 LAEWFTTNEPEKWN 102
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 6.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 326 EPQMWNKEEVLHGPISIDTAREIANIYNKNRNE 424
EP K VL GP + R+ + I N++ E
Sbjct: 198 EPSSSTKSYVLEGPRNGKRKRKSSTIENESETE 230
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,045
Number of Sequences: 438
Number of extensions: 4081
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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