Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_G02
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB...    30   2.7  
AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA...    30   2.7  

>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
           isoform B protein.
          Length = 1035

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 479 CCIVGETNNVGSNVCTYICLVILSVFAV 562
           CC+  E N   S  C Y C ++L++ A+
Sbjct: 77  CCVAWEKNERSSRGCRYCCGILLAILAL 104


>AE014296-559|AAF47715.2|  938|Drosophila melanogaster CG14955-PA,
           isoform A protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 479 CCIVGETNNVGSNVCTYICLVILSVFAV 562
           CC+  E N   S  C Y C ++L++ A+
Sbjct: 77  CCVAWEKNERSSRGCRYCCGILLAILAL 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,165,965
Number of Sequences: 53049
Number of extensions: 381583
Number of successful extensions: 611
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)