Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F24
         (560 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.34 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.5  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   9.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 27  FSCYHCDLRWVSSNQTFAH 83
           + C HC +++  SNQ  AH
Sbjct: 219 YGCEHCSMKFSDSNQLKAH 237



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 27  FSCYHCDLRWVSSNQTFAHPRV 92
           + C HCD ++V       H RV
Sbjct: 191 YRCEHCDRQFVQVANLRRHLRV 212


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 142 QFCPATTTLTNYIGNRSLWSE 204
           Q    TTT  NY     LW E
Sbjct: 411 QHLQKTTTFMNYTDLHDLWGE 431


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 27  FSCYHCDLRWVSSNQTFAHPRV 92
           + C HCD ++V       H RV
Sbjct: 38  YRCEHCDRQFVQVANLRRHLRV 59


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 104 LIKMLAIMAPLPDSFVLPQLHSPITSVTDPSGLKLAPVSLH 226
           L K L +    P   +LP+   P+T +    G+   P+S H
Sbjct: 32  LNKYLLVKHSKPKMPLLPKTPLPLTLLYKLLGIIQFPISAH 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,600
Number of Sequences: 336
Number of extensions: 3012
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)