Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F24
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    25   1.3  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   5.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.2  

>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 162 SCGRTKLSGKGAMMASIFINCVKAHAGVQTFG 67
           +CG   L G  A++++IF     + A V+T+G
Sbjct: 335 TCGVHNLHGMPAVLSAIFSAIYASFASVETYG 366


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 155 PQLHSPITSVTDPSGLKLAPVSLHHINNECESL 253
           PQ+ SPI +  D   L+L P     + ++ E L
Sbjct: 14  PQISSPILNPEDTQKLQLLPAVRRPLLSDAEKL 46


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 457 FGLISGGDGGYRLADWSSCSNNLLYSIFGA 368
           FG ISGG GGY     S  +      + GA
Sbjct: 769 FGGISGGQGGYATNFGSGLTGGTESQLIGA 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,846
Number of Sequences: 2352
Number of extensions: 13243
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)