Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F23
         (429 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7PT24 Cluster: Chromosome chr8 scaffold_29, whole geno...    31   7.7  
UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY0143...    31   7.7  
UniRef50_A0DRD8 Cluster: Chromosome undetermined scaffold_60, wh...    31   7.7  

>UniRef50_A7PT24 Cluster: Chromosome chr8 scaffold_29, whole genome
           shotgun sequence; n=4; core eudicotyledons|Rep:
           Chromosome chr8 scaffold_29, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 344

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 199 CRCTNCLSVNF*TKLFI*SHDDENIYIYEMIHLCFSIFSY 318
           CRCT+   V      F+ +H D N+Y+YE   L +S  S+
Sbjct: 22  CRCTSIAWVPDGDGAFVVAHADGNLYVYEKASLKYSDSSF 61


>UniRef50_Q7RPL9 Cluster: Putative uncharacterized protein PY01439;
            n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01439 - Plasmodium yoelii yoelii
          Length = 4099

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -1

Query: 174  VFNLAPSN*IVLQFKQLIHNII-YYTIVINYHPQSYLRNV 58
            +F +   N  + ++K  I NII YYTI+I +HPQ YL N+
Sbjct: 1913 LFVIFSKNHKLKKYKTCIQNIIKYYTILIPHHPQ-YLYNL 1951


>UniRef50_A0DRD8 Cluster: Chromosome undetermined scaffold_60, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_60,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 402

 Score = 31.5 bits (68), Expect = 7.7
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 245 KSFVQKLTDKQFVQRQIRNDLHQGCLI*HL 156
           ++F+QK+ DKQF   QI+N+LHQ   + H+
Sbjct: 261 RTFLQKVVDKQF--EQIKNELHQDPQLVHI 288


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,594,407
Number of Sequences: 1657284
Number of extensions: 4400321
Number of successful extensions: 7017
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7016
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)