Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F23
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   8.7  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    20   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 292 VSFHKCKYFHRHVTR 248
           +SF K  Y H+H+++
Sbjct: 221 ISFSKICYLHQHLSK 235


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 292 VSFHKCKYFHRHVTR 248
           +SF K  Y H+H+++
Sbjct: 239 ISFSKICYLHQHLSK 253


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 341 YLYLK*F*FKKVNQPDTVCIFFC 409
           ++YL+ F F +++   TV  F C
Sbjct: 325 FIYLRTFGFLEIDDQGTVESFVC 347


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 193 LICRCTNCLSVNF 231
           ++C CTN LS  +
Sbjct: 8   VVCACTNVLSEEY 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,963
Number of Sequences: 336
Number of extensions: 1451
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)