Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F22
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   0.80 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    24   0.80 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    24   0.80 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   4.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   7.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   9.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   9.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   9.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   9.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   9.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   9.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           20   9.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    20   9.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   9.8  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +3

Query: 318 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 464
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 227 ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 276


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +3

Query: 318 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 464
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 65


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = +3

Query: 318 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRDN-SNQTCYNCNKSGHISR 464
           A E        SC   N +  ++ NC   GR N +N+      K  H ++
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHFNK 65


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 354 CYNCNKTGHIARNCPEGGRDNSNQTCYNC 440
           C +CNK+   A N     R +S +  + C
Sbjct: 24  CIDCNKSFSQAANLTAHVRTHSGEKPFRC 52


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 354 CYNCNKTGHIARNCPEGGRDNSNQTCYNC 440
           C +CNK+   A N     R +S +  + C
Sbjct: 280 CIDCNKSFSQAANLTAHVRTHSGEKPFRC 308


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +3

Query: 372 TGHIARNCPEGGR-------DNSNQTCYNC 440
           +G +  NCP GG+       +N+ + C +C
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVKPCVSC 48


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 23  QPTMGDYTQLQPQR 36


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 209 QPAAGEVLQVQPHR 250
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,390
Number of Sequences: 336
Number of extensions: 1787
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)