Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F19
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.66 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   4.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   4.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   6.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 400 SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPHL 495
           S HH  GN  +GP   P      H+   + HL
Sbjct: 333 SPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 476 LQGFLIFHSYGGG 514
           L+G +I HSYGGG
Sbjct: 656 LRGSIIDHSYGGG 668


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 476 LQGFLIFHSYGGG 514
           L+G +I HSYGGG
Sbjct: 694 LRGSIIDHSYGGG 706


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 522 RTVPPPYEWK 493
           RT PPP +WK
Sbjct: 413 RTSPPPEDWK 422


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 493 LPLVRWWHGSGFTS 534
           LPL+ W +G GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 493 LPLVRWWHGSGFTS 534
           LPL+ W +G GF S
Sbjct: 158 LPLLVWIYGGGFMS 171


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 245 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 340
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 146 PSRHFRSGLR 117
           P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,740
Number of Sequences: 438
Number of extensions: 4561
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)