Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F18
(426 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 200 6e-52
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 200 6e-52
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 200 6e-52
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 200 6e-52
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 44 1e-04
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 44 1e-04
AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA... 30 1.5
AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC... 29 3.4
AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB... 29 3.4
AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG channel-... 29 3.4
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P... 27 7.9
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 200 bits (488), Expect = 6e-52
Identities = 90/116 (77%), Positives = 105/116 (90%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 422
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAI
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAI 116
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 200 bits (488), Expect = 6e-52
Identities = 90/116 (77%), Positives = 105/116 (90%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 422
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAI
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAI 116
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 200 bits (488), Expect = 6e-52
Identities = 90/116 (77%), Positives = 105/116 (90%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 422
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAI
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAI 116
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 200 bits (488), Expect = 6e-52
Identities = 90/116 (77%), Positives = 105/116 (90%)
Frame = +3
Query: 75 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 254
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 255 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 422
MRKAI+ HLE NP LEKLLPHIKGNVGFVFT+GDL +VRDKLLE+KV+APARPGAI
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAI 116
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 272
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 273 DHLETNPALEKLLPHIKGNVGFVFT 347
E P L KL + G VG +FT
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFT 106
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +3
Query: 99 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 272
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 273 DHLETNPALEKLLPHIKGNVGFVFT 347
E P L KL + G VG +FT
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFT 106
>AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA
protein.
Length = 1413
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 389 VLQQFITHINKISTGEDKANISLDVRKQF 303
VL Q + +INKI++G +AN+S ++K +
Sbjct: 162 VLSQRLANINKIASGNTQANLSKQLQKNY 190
>AE014298-2144|AAN09666.2| 1453|Drosophila melanogaster CG9176-PC,
isoform C protein.
Length = 1453
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 304
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>AE014298-2143|AAF48450.3| 1853|Drosophila melanogaster CG9176-PB,
isoform B protein.
Length = 1853
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 304
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>AB030577-1|BAA89278.1| 1463|Drosophila melanogaster CNG
channel-like protein.
Length = 1463
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 TVGRIPKMFHSGCGQCRLATDATDPYFIAWSQ-HCAHGQKHHDEESHQGPS*NKSSSRK 304
T+GR ++ C + A +D A++ H H Q HH + HQ S S+S+K
Sbjct: 553 TLGR-KRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKK 610
>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
protein.
Length = 1025
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 36 LKFLRSPYFTQSKMGREDKATWKSNYFVKIIQL 134
++F+RS YFT R K TW + + QL
Sbjct: 891 IQFMRSKYFTYGNYSRYPKYTWCKRFRSRAEQL 923
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,458,305
Number of Sequences: 53049
Number of extensions: 493926
Number of successful extensions: 2077
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2077
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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