Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F17
(435 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 155 3e-37
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 145 4e-34
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 133 1e-30
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 132 4e-30
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 126 2e-28
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 123 2e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 122 4e-27
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 104 9e-22
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 103 1e-21
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 99 5e-20
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 97 2e-19
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 93 2e-18
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 92 5e-18
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 81 1e-14
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 80 2e-14
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 80 2e-14
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 69 6e-11
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 68 1e-10
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 66 4e-10
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 65 5e-10
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 64 9e-10
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 62 4e-09
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 62 7e-09
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 2e-08
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 60 2e-08
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 58 1e-07
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 57 1e-07
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 45 6e-04
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 44 0.001
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 42 0.004
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.007
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 38 0.12
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 35 0.65
UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of str... 35 0.65
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 33 2.0
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 33 2.6
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 32 4.6
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 4.6
UniRef50_Q933M2 Cluster: Ysp1; n=3; Yersinia enterocolitica|Rep:... 32 6.0
UniRef50_Q47RW4 Cluster: Putative cytochrome D ubiquinol oxidase... 31 8.0
UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;... 31 8.0
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 155 bits (377), Expect = 3e-37
Identities = 75/112 (66%), Positives = 84/112 (75%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXX 278
MSG LD+L + EEDV K LAA THLG N++FQME Y+YKR+ DG ++INL RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 279 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQI
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQI 112
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 145 bits (351), Expect = 4e-34
Identities = 66/112 (58%), Positives = 85/112 (75%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXX 278
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+ +TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 279 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+PADV V++++ FGQRA+LKFA +TGA PIAGRFTPG FTNQI
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQI 112
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 133 bits (322), Expect = 1e-30
Identities = 59/110 (53%), Positives = 80/110 (72%)
Frame = +3
Query: 105 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXX 284
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+KRR DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 285 XXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYI 114
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 132 bits (318), Expect = 4e-30
Identities = 63/103 (61%), Positives = 70/103 (67%)
Frame = +3
Query: 126 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXE 305
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 306 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
+P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYI 111
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 126 bits (304), Expect = 2e-28
Identities = 56/112 (50%), Positives = 74/112 (66%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXX 278
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L++TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 279 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+PADV +I + QR LKF +TG T + GRFTPGAFTNQI
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQI 112
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 123 bits (296), Expect = 2e-27
Identities = 57/105 (54%), Positives = 70/105 (66%)
Frame = +3
Query: 120 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXX 299
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 300 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQM 116
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 122 bits (293), Expect = 4e-27
Identities = 55/104 (52%), Positives = 71/104 (68%)
Frame = +3
Query: 120 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXX 299
++ E D+ MLAA HLG +NV+FQME YV+KRR DG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 300 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ 431
E+P DV ++R +GQRAVLKFA +TGA +AGR TPG +TNQ
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQ 134
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 104 bits (249), Expect = 9e-22
Identities = 47/103 (45%), Positives = 65/103 (63%)
Frame = +3
Query: 126 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXE 305
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL + W K +
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 306 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
DPA++ V+++R QRA+LKF +T AT GRF PG FTN++
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRM 117
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 103 bits (248), Expect = 1e-21
Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +3
Query: 114 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEK--XXXXXX 287
D+L S ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 288 XXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQI
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQI 123
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 98.7 bits (235), Expect = 5e-20
Identities = 47/112 (41%), Positives = 65/112 (58%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXX 278
M+ L E+ + ML A H+G +NV +M YVY R +G H+INL+ T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 279 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
+P +V V+S+R +G RAVLKF+ + G+ PIAGR+ PG TNQI
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQI 112
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 96.7 bits (230), Expect = 2e-19
Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Frame = +3
Query: 123 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXX 299
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL+ T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 300 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
E+P DV IS+++FG RAV KFA GA + RFTPG FTN
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTN 108
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/99 (44%), Positives = 61/99 (61%)
Frame = +3
Query: 138 DVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPAD 317
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK E+P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 318 VFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
V V S+R FGQRA+ KF+ G + +AGRF PG FTNQI
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQI 132
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 91.9 bits (218), Expect = 5e-18
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = +3
Query: 114 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXX 293
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 294 XXXEDPADVFVISSRAFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQ 431
E P DV V+SSR GQRAV+KFA +T A+ + R+TPG TNQ
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQ 137
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 81.0 bits (191), Expect = 1e-14
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 114 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRG-DGTHVINLSRTWEKXXXXXXX 290
D + + +E V ++ + +HLG + N Y+Y R D ++I+++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 291 XXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTN 115
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 79.8 bits (188), Expect = 2e-14
Identities = 42/95 (44%), Positives = 59/95 (62%)
Frame = +3
Query: 150 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADVFVI 329
+L A THLG N +F+M +YKR +G ++NL R++EK + P++V VI
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVI 58
Query: 330 SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
SSR GQ A+LK AA +GA+P G FT G FT+Q+
Sbjct: 59 SSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQV 93
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 79.8 bits (188), Expect = 2e-14
Identities = 37/68 (54%), Positives = 45/68 (66%)
Frame = +3
Query: 231 GTHVINLSRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFT 410
G +INL +TWEK E+P D+ V S+R +GQRAVLKFA +TGA IAGR T
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHT 105
Query: 411 PGAFTNQI 434
PG FTNQ+
Sbjct: 106 PGTFTNQL 113
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 68.5 bits (160), Expect = 6e-11
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 303 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QI
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQI 192
Score = 33.1 bits (72), Expect = 2.6
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 96 TMSGGLDLLALSEEDVTKMLAATTH 170
TM G D+L ++EEDV K LAA TH
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 67.7 bits (158), Expect = 1e-10
Identities = 35/103 (33%), Positives = 55/103 (53%)
Frame = +3
Query: 120 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXX 299
+ + EE+ K + H+G + + M+ Y++K R DG +++++ +T K
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLAR 61
Query: 300 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
E P D+ V++ R + R V KFA TGAT I GRF PG TN
Sbjct: 62 FE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTN 103
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 65.7 bits (153), Expect = 4e-10
Identities = 30/101 (29%), Positives = 50/101 (49%)
Frame = +3
Query: 129 SEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXED 308
+E D+ K+L H+G M+ YV+K+R DG ++IN+ +T +K E
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 309 PADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ 431
P + +SS Q A++KF+ I ++ PG TN+
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNK 104
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 65.3 bits (152), Expect = 5e-10
Identities = 36/89 (40%), Positives = 48/89 (53%)
Frame = +3
Query: 168 HLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 347
HL N + Q++ YVYK++ DG +VIN S + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVINRSFCSQLEPLLPLKTQLMS-----VVTSSRTTG 55
Query: 348 QRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
Q+AVL FAA G+ P +GRFTPG T+Q+
Sbjct: 56 QQAVLSFAAAVGSAPTSGRFTPGTLTDQV 84
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 64.5 bits (150), Expect = 9e-10
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = +3
Query: 141 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADV 320
V L+A H+G + ME++VY+ R +G +V+++ + E+ DP D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDI 97
Query: 321 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
V++SR + R V KFA G+ + GR PG FTN
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTN 133
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 62.5 bits (145), Expect = 4e-09
Identities = 32/96 (33%), Positives = 49/96 (51%)
Frame = +3
Query: 141 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADV 320
+ + LAA H+G + M +VY+ R DG +V+++ T E+ DPA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARI 98
Query: 321 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
V+SSR +GQ F+ G + GRF PG+ TN
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTN 134
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 61.7 bits (143), Expect = 7e-09
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = +3
Query: 153 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADVFVIS 332
LA+ H+G + ME ++Y+ R DG +V+++ +T E+ E P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72
Query: 333 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
R + + +F +TG +AGRF PG TN
Sbjct: 73 RRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTN 104
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGT-HVINL 251
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/92 (33%), Positives = 47/92 (51%)
Frame = +3
Query: 153 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADVFVIS 332
LAA +G + + ME ++Y R DG +++++ +T E+ DP+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVS 79
Query: 333 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
R +G R V KF G P+ GR PG FTN
Sbjct: 80 GRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTN 111
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 57.6 bits (133), Expect = 1e-07
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = -3
Query: 268 FSHVRERLITCVPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 89
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 88 VRVTTKRV*CHWE 50
+ T R C WE
Sbjct: 81 KELRTSR--CRWE 91
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 57.2 bits (132), Expect = 1e-07
Identities = 32/96 (33%), Positives = 46/96 (47%)
Frame = +3
Query: 141 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADV 320
V L A H+G + ME ++++ R DG +V+++S T E+ E P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140
Query: 321 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
SSR +G+ KFA GA GRF PG TN
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTN 176
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 52.0 bits (119), Expect = 5e-06
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 216 KRRGDGTHVINLSRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKFAAHTGA 386
+R+ DG+ ++ + WEK ++PA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGS--FSIGKKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 387 TPIAGRFTPGAFTNQI 434
IA RFTPG+ TN +
Sbjct: 70 INIADRFTPGSSTNYV 85
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 45.2 bits (102), Expect = 6e-04
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +3
Query: 99 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQM 200
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
Score = 40.7 bits (91), Expect = 0.013
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = +3
Query: 357 VLKFAAHTGATPIAGRFTPGAFTNQI 434
VLK TGA PIAG FTPG FTNQI
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQI 70
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 342 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQI 434
F Q A+LKFA +TGA IAGR TPG TNQ+
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQL 63
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 42.3 bits (95), Expect = 0.004
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +3
Query: 159 ATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADVFVISSR 338
A H+G ++ M+ YV K R DG + ++ + E+ E P ++ V+ R
Sbjct: 13 AGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRR 71
Query: 339 AFGQRAVLKFAAHTGATPIAGRFTPGAFTN 428
+ KF+ T GR+ PG TN
Sbjct: 72 ETAITPIKKFSEITKVKAFPGRYPPGTLTN 101
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.5 bits (93), Expect = 0.007
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 357 VLKFAAHTGATPIAGRFTPGAF 422
+LKFAA TGATPIAG FTPG F
Sbjct: 1 MLKFAAATGATPIAGHFTPGTF 22
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 37.5 bits (83), Expect = 0.12
Identities = 17/97 (17%), Positives = 46/97 (47%)
Frame = +3
Query: 141 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXXEDPADV 320
++ ++ + ++GA V+F+M+ ++ K++ + + INL T++ +
Sbjct: 7 ISLLIYSQNYIGAAYVDFRMKNHIIKQKNNLNNKINLFTTYKNLIYLPSLLFSISSMRKL 66
Query: 321 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQ 431
+I ++ ++A+ + I + PG F+N+
Sbjct: 67 AIIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNR 103
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 35.1 bits (77), Expect = 0.65
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 213 YKRRGDGTHVINLSRTWEK-XXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGAT 389
Y + DGT++ L+RTWEK E+ +V +ISS TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISSLG---------TNFTGAI 107
Query: 390 PIAGRFTPGAFTNQI 434
P AG F P F N I
Sbjct: 108 PTAGSFIPRPFINLI 122
>UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 35.1 bits (77), Expect = 0.65
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +3
Query: 129 SEEDVTKMLAATTHLG--AENVNFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXX 302
+E VT +LAA HLG E + + ++Y R DG +I+L +T +
Sbjct: 171 TEATVTSLLAAGAHLGHAVELGHVNNQPFIYGVR-DGISIIDLEQTVTQLRRAARITEAV 229
Query: 303 EDPADVFVISSRAFGQRAVLK-FAAHTGATPIAGRFTPGAFTN 428
+ + GQ+ L+ + GA+ + ++ PGA TN
Sbjct: 230 AKQNGLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITN 272
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 33.5 bits (73), Expect = 2.0
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 417 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 280
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 33.1 bits (72), Expect = 2.6
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 135 EDVTK--MLAATTHLGAENV--NFQMETYVYKRRGDGTHVINLSRTWEKXXXXXXXXXXX 302
ED+T +LA+ TH+G + N Y+Y R G H+I+L T
Sbjct: 126 EDITLELLLASQTHIGHKTSLWNPANSRYIYGVR-QGVHMISLETTAAHLRRAARVVEEV 184
Query: 303 EDPADVFVISSRAFGQRAVLKFAAH-TGATPIAGRFTPGAFTNQ 431
A + + GQ ++ AA GA + ++TPG TN+
Sbjct: 185 AYNAGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITNR 228
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.3 bits (70), Expect = 4.6
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 387 LRQCGQQI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 277
L+Q Q + QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 4.6
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 339 AFGQRAVLKFAAHTGATPIAGRFTP 413
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_Q933M2 Cluster: Ysp1; n=3; Yersinia enterocolitica|Rep:
Ysp1 - Yersinia enterocolitica
Length = 676
Score = 31.9 bits (69), Expect = 6.0
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 TLTVLLRPFASQWHYTRLVVTLTNATMSGGLDL-LALSEEDVTKMLAATTHLGA 179
T +V R + T +V+ +TNA +SGGL+L + D+ +M+A H A
Sbjct: 573 TASVTARKIEMGMNGTNMVLGVTNAAVSGGLNLQVGAKTRDMKEMMAGMMHNNA 626
>UniRef50_Q47RW4 Cluster: Putative cytochrome D ubiquinol oxidase
subunit II; n=1; Thermobifida fusca YX|Rep: Putative
cytochrome D ubiquinol oxidase subunit II - Thermobifida
fusca (strain YX)
Length = 304
Score = 31.5 bits (68), Expect = 8.0
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 433 IWLVNAPGVKRPAIGVAPVWAANLSTARWP 344
+WLV GV G+ PVW A + TA+WP
Sbjct: 56 VWLVATIGV---VAGLVPVWEAAVVTAQWP 82
>UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;
n=1; Dictyostelium discoideum AX4|Rep: Putative MADS-box
transcription factor - Dictyostelium discoideum AX4
Length = 1050
Score = 31.5 bits (68), Expect = 8.0
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -1
Query: 417 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAKD*LR 238
HQ+ QQ Q QQ QH Q H Q Q P+ QQH+Q Q P + +
Sbjct: 535 HQQHQHQQHPQMQQQQQQQQQH--QQHPQMQQIQQQQHPQMQQHQQHQQQHPQMQQQHMN 592
Query: 237 AYRHHGVYKRTSPSGN 190
++ + + +SP N
Sbjct: 593 NHQINHHHLNSSPEIN 608
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,531,178
Number of Sequences: 1657284
Number of extensions: 7661109
Number of successful extensions: 17571
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 17037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17507
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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