Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F14
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 101 4e-23
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 95 4e-21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 91 9e-20
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 80 1e-16
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 71 8e-14
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 67 1e-12
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 63 2e-11
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 53 2e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 26 2.2
SPBC1711.04 |||methylenetetrahydrofolate reductase |Schizosaccha... 25 5.0
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 24 8.7
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 24 8.7
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 101 bits (243), Expect = 4e-23
Identities = 45/85 (52%), Positives = 54/85 (63%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YY +FHRNI F++Q SIWG+ F+DEF LKH RG++SMAN G N
Sbjct: 311 YYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF YG HLD K+T+FGR
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGR 395
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 95.1 bits (226), Expect = 4e-21
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YYDG +FHR I F++Q SI+G KF+DE +L HT G++SMAN GPN
Sbjct: 37 YYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TN SQFF T P LD K+T+FGR
Sbjct: 97 TNSSQFFITLAPTPWLDGKHTIFGR 121
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 90.6 bits (215), Expect = 9e-20
Identities = 44/87 (50%), Positives = 51/87 (58%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YYD +FHR IK F++Q SIW + FEDE LKH VSMAN+GPN
Sbjct: 490 YYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR*Y 272
TNGSQFF T P LD K+T+F R Y
Sbjct: 550 TNGSQFFITTDLTPWLDGKHTIFARAY 576
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 80.2 bits (189), Expect = 1e-16
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y G FHR IK F++Q SI+G KFEDE ELKH ++SMAN GPN
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDE-NFELKHDKPFLLSMANAGPN 109
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF T PHLD K+ +FG+
Sbjct: 110 TNGSQFFITTVPTPHLDGKHVVFGK 134
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 70.9 bits (166), Expect = 8e-14
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y G FHR I F++Q SI+G KF DE LKH G++SMAN GPN
Sbjct: 46 YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDE-NFALKHNKPGLLSMANAGPN 104
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFG 263
TNGSQFF T P LD K+ +FG
Sbjct: 105 TNGSQFFITTVVTPWLDGKHVVFG 128
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 66.9 bits (156), Expect = 1e-12
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y+G +FHR I F++Q SI+G +F DE +L H G++SMAN GP+
Sbjct: 71 YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDE-NFKLSHQRPGLLSMANAGPD 129
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFG 263
+NGSQFF T + P LD + +FG
Sbjct: 130 SNGSQFFITTVKTPWLDGHHVVFG 153
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 62.9 bits (146), Expect = 2e-11
Identities = 33/85 (38%), Positives = 41/85 (48%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YYDG + HR + F++Q SI+G F E L+ RG+V MA
Sbjct: 48 YYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
N SQFF T G P + K TLFGR
Sbjct: 108 GNNSQFFITLGPTPEWNGKQTLFGR 132
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 52.8 bits (121), Expect = 2e-08
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXX-XXSIWG-RKFEDEFKEELKHTSRGMVSMANNGP 188
Y FHR I+GF++Q +I+ R F DE LKH G++SMAN G
Sbjct: 55 YKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDE-NFTLKHDRPGLLSMANAGK 113
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFG 263
++NG QFF T LD K+ +FG
Sbjct: 114 DSNGCQFFITTVPCDFLDGKHVVFG 138
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 184 DLTQMVANSSSPMESNLIWI*NIHCLEGSIRNHKIFKKIPLNYHEVKCMYLDIKN 348
++T+ + M+++L++ H SI KIFK + ++KC +IKN
Sbjct: 137 EITKQARRYAKAMKASLVFCSTSH----SINVQKIFKIVLAKVFDLKCTIPEIKN 187
>SPBC1711.04 |||methylenetetrahydrofolate reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 320
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 117 FEDEFKEELKHTSRGMVSMANNGPNTNGSQFFF 215
F+ E +E K + ANN P+ NG +F
Sbjct: 69 FQYELREVPKDDLEDAIVEANNDPSVNGIMIYF 101
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 24.2 bits (50), Expect = 8.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 159 GMVSMANNGPNTNGSQFFFTYG 224
G+ + +NN P+TN S F++G
Sbjct: 906 GVKASSNNNPSTNSSTAPFSFG 927
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.2 bits (50), Expect = 8.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 175 QIMDLTQMVANSSSPMESN 231
QIMDLTQ ++++++P N
Sbjct: 448 QIMDLTQPISSTNAPTHLN 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,783,049
Number of Sequences: 5004
Number of extensions: 34219
Number of successful extensions: 72
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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