Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0004_F14
(433 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0214 + 1634171-1634173,1634263-1634742 122 9e-29
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 103 6e-23
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 101 2e-22
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 99 1e-21
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 88 2e-18
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 85 3e-17
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 80 9e-16
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 79 2e-15
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 73 8e-14
09_06_0359 + 22508900-22509439 68 4e-12
02_01_0160 + 1116160-1116678 67 5e-12
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 66 9e-12
10_01_0309 + 3417602-3418147 66 2e-11
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 66 2e-11
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 64 4e-11
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 62 2e-10
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 49 1e-06
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 44 4e-06
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 42 2e-04
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 40 9e-04
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 31 0.40
11_06_0092 + 19973364-19975983,19976272-19976648 28 2.8
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 27 4.9
05_07_0168 + 28122429-28122650,28122651-28122725,28123066-281231... 27 4.9
06_03_1222 - 28521799-28521900,28521952-28522029,28522292-285243... 27 6.5
06_03_1214 + 28469848-28473048 27 8.6
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 122 bits (295), Expect = 9e-29
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YYDG +FHRNIKGF++Q SIWG+KF DEF+E LKH +RG++SMAN+GPN
Sbjct: 36 YYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPN 95
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF TY +QPHL+ YT+F +
Sbjct: 96 TNGSQFFITYAKQPHLNGHYTVFAK 120
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 103 bits (247), Expect = 6e-23
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YY+G +FHR+IK F++Q SIWG+ F+DE +L H+ RG+VSMAN+GP+
Sbjct: 380 YYNGLIFHRSIKNFMIQGGDPTGTGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPH 439
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFG 263
TNGSQFF Y PHL+ K+T+FG
Sbjct: 440 TNGSQFFILYKSAPHLNFKHTVFG 463
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 101 bits (243), Expect = 2e-22
Identities = 49/87 (56%), Positives = 56/87 (64%)
Frame = +3
Query: 6 RDYYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNG 185
R YYD +FHR IK FIVQ SI+G KFEDE + ELKHT G++SMAN G
Sbjct: 43 RGYYDNVIFHRIIKDFIVQGGDPTGTGRGGESIYGAKFEDEIRPELKHTGAGILSMANAG 102
Query: 186 PNTNGSQFFFTYGEQPHLDLKYTLFGR 266
PNTNGSQFF T LD K+T+FGR
Sbjct: 103 PNTNGSQFFITLAPCQSLDGKHTIFGR 129
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 99.1 bits (236), Expect = 1e-21
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
YYD +FHR IKGF++Q SIWGR+FEDEF + L+H +SMAN GPN
Sbjct: 531 YYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 590
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF T P LD K+T+FGR
Sbjct: 591 TNGSQFFITTVATPWLDNKHTVFGR 615
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 88.2 bits (209), Expect = 2e-18
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGP 188
+ G FHR IKGF+VQ SI+G KFEDE LKH +GM+SMAN+GP
Sbjct: 116 HVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDE-NFVLKHERKGMLSMANSGP 174
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
NTNGSQFF T PHLD K+ +FGR
Sbjct: 175 NTNGSQFFITTTRTPHLDGKHVVFGR 200
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 84.6 bits (200), Expect = 3e-17
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGP 188
YY G LFHR IKGF+ Q SI+G FEDE L+H RG++SMAN GP
Sbjct: 58 YYKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYGGTFEDE-NFVLRHDERGLLSMANAGP 116
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
NTNGSQFF T+ LD K T+FG+
Sbjct: 117 NTNGSQFFITFKHNSRLDRKSTVFGK 142
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 79.8 bits (188), Expect = 9e-16
Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 21 GCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPNTN 197
G HR +KGF+VQ SI+G FEDE LKH +GM+SMAN GP+TN
Sbjct: 101 GSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDE-NFVLKHERKGMLSMANAGPDTN 159
Query: 198 GSQFFFTYGEQPHLDLKYTLFGR 266
GSQFF T PHLD K+ +FGR
Sbjct: 160 GSQFFITTTRTPHLDGKHVVFGR 182
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNG-P 188
YYDG LFHR IK F+VQ SI+G F DEF L+ RG+V+ AN G P
Sbjct: 48 YYDGTLFHRVIKSFLVQGGDPTGSGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTP 107
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
++NGSQFF + LD K T+FG+
Sbjct: 108 HSNGSQFFISLDRCDWLDKKNTIFGK 133
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 73.3 bits (172), Expect = 8e-14
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y G FHR IK F++Q SI+GR F+DE +L HT G+VSMAN GPN
Sbjct: 130 YKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE-NFKLVHTGPGVVSMANAGPN 188
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF + P LD ++ +FG+
Sbjct: 189 TNGSQFFICTVKTPWLDGRHVVFGQ 213
>09_06_0359 + 22508900-22509439
Length = 179
Score = 67.7 bits (158), Expect = 4e-12
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGP 188
+Y G FHR I F+ Q SI+G +F DE +L+HT G++SMAN GP
Sbjct: 56 HYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADE-NFKLRHTGPGVLSMANAGP 114
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
NTNGSQFF LD K+ +FG+
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGK 140
>02_01_0160 + 1116160-1116678
Length = 172
Score = 67.3 bits (157), Expect = 5e-12
Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDE-FKEELKHTSRGMVSMANNG 185
+Y G FHR I F+ Q SI+G KF DE FK KH S G++SMAN G
Sbjct: 54 HYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFK--FKHDSPGILSMANAG 111
Query: 186 PNTNGSQFFFTYGEQPHLDLKYTLFGR 266
PNTNGSQFF LD K+ +FGR
Sbjct: 112 PNTNGSQFFICTVPCSWLDGKHVVFGR 138
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 66.5 bits (155), Expect = 9e-12
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIW-------GRKFEDEFKEELKHTSRGMVS 170
YY+GCLFH+ K F+ Q S++ R F+DE + +L+H+ +G ++
Sbjct: 36 YYNGCLFHKVEKDFLAQTGDPTGTGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIA 95
Query: 171 MANNGPNTNGSQFFFTYGEQ-PHLDLKYTLFG 263
MA+ G N N SQF+ T + +LD K+T+FG
Sbjct: 96 MASAGENCNASQFYITLRDDVDYLDDKHTVFG 127
>10_01_0309 + 3417602-3418147
Length = 181
Score = 65.7 bits (153), Expect = 2e-11
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 TRDYYDGCLFHRNIKGFIVQXXXXXXXXXXX--XSIWG--RKFEDEFKEELKHTSRGMVS 170
+R +Y G FHR + GF+ Q ++ G R F DE +KH G+VS
Sbjct: 58 SRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDE-GFAVKHDGPGVVS 116
Query: 171 MANNGPNTNGSQFFFTYGEQPHLDLKYTLFGR 266
MAN GPNTNGSQFF T + P LD ++ FGR
Sbjct: 117 MANAGPNTNGSQFFITVDKAPWLDGRHVAFGR 148
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 12 YYDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGP 188
++ G FHR I F++Q SI+G KF DE ++KHT G++SMAN G
Sbjct: 101 HFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADE-NFKIKHTGPGLLSMANAGR 159
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
+TNGSQFF T LD K+ +FG+
Sbjct: 160 DTNGSQFFITTVTTSWLDGKHVVFGK 185
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 64.5 bits (150), Expect = 4e-11
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXXX-SIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y GC FHR IK F++Q SI+G F+DE LKHT G++SMAN GP+
Sbjct: 110 YKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDE-NFTLKHTGPGVLSMANAGPD 168
Query: 192 TNGSQFF 212
TNGSQFF
Sbjct: 169 TNGSQFF 175
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXX-XSIWGRKFEDEFKEELKHTSRGMVSMANNGPN 191
Y G FHR I GF++Q SI+G F DE ++ H++ G++SMAN +
Sbjct: 91 YKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDE-NFKINHSAPGLLSMANYAKD 149
Query: 192 TNGSQFFFTYGEQPHLDLKYTLFGR 266
TNGSQFF T + LD K+ +FG+
Sbjct: 150 TNGSQFFITTVKLTRLDGKHVVFGK 174
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 111 RKFEDEFKEELKHTSRGMVSMANNGPNTNGSQFFFTYGE-QPHLDLKYTLFG 263
R F+DE EL+H+ G ++MA+ G N N SQF+ T + +LD K+T+FG
Sbjct: 106 RFFDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFG 157
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 44.4 bits (100), Expect(2) = 4e-06
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Frame = +3
Query: 15 YDGCLFHRNIKGFIVQXXXXXXXXXXX-XSIWGRKFEDEFKEELKHTSRGMVSM------ 173
Y GC FHR IK F++Q SI+G KF+DE KHT G++SM
Sbjct: 86 YKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDE-NFIAKHTGPGLLSMVRSYYI 144
Query: 174 -------------ANNGPNTNGSQFFFTYG 224
AN+G N+NGSQ F+ G
Sbjct: 145 YIKLEQDIEASSKANSGVNSNGSQIFYPAG 174
Score = 23.0 bits (47), Expect(2) = 4e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 204 QFFFTYGEQPHLDLKYTLFGR 266
QFF T + LD K+ +FGR
Sbjct: 200 QFFITCAKCEWLDNKHVVFGR 220
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 141 LKHTSRGMVSMANNG-PNTNGSQFFFTYGEQPHLDLKYTLFGR 266
+KH RG++SM + PN+ GS F G+ PHLD +Y +FGR
Sbjct: 157 VKHV-RGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGR 198
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 39.9 bits (89), Expect = 9e-04
Identities = 16/35 (45%), Positives = 27/35 (77%)
Frame = +3
Query: 162 MVSMANNGPNTNGSQFFFTYGEQPHLDLKYTLFGR 266
+++MAN+GP++NGSQF+ T + LD ++ +FGR
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGR 151
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/86 (26%), Positives = 33/86 (38%)
Frame = +3
Query: 9 DYYDGCLFHRNIKGFIVQXXXXXXXXXXXXSIWGRKFEDEFKEELKHTSRGMVSMANNGP 188
+++ G F IK F++Q I K E KH + M+ N P
Sbjct: 128 NHFKGMPFRHVIKNFVIQGGDFDFNGAAQEWILKAKASGENALSPKHEAF-MIGTTKN-P 185
Query: 189 NTNGSQFFFTYGEQPHLDLKYTLFGR 266
N G F T P L+ K +FG+
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQ 211
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 268 SIRNHKIFKKIPLNYHE-VKCMYLDIKNFSLTGSIVSN 378
SIR++KI +P + V YL + N SLTGS+ S+
Sbjct: 356 SIRDNKISGSLPRDIGNLVNLQYLSLANNSLTGSLPSS 393
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 232 GCSP*VKKNWLPFVLGPLFAMLTIPLE 152
GCS + K+ L + + PLF M +PLE
Sbjct: 1605 GCSAVLSKSALVYEIMPLFTMAELPLE 1631
>05_07_0168 +
28122429-28122650,28122651-28122725,28123066-28123122,
28123248-28123411,28123672-28123806,28123908-28124010,
28124165-28124264,28124348-28124556
Length = 354
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 126 EFKEELKHTSRGMVSMANNGPNTNGSQFFFTYGEQPHLDL 245
EF+ + T G +S+ + N NG F F++G +L +
Sbjct: 175 EFRLRVSLTKDGNLSLVSRIRNVNGKPFSFSFGYHTYLSV 214
>06_03_1222 -
28521799-28521900,28521952-28522029,28522292-28524335,
28525188-28525303
Length = 779
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 238 WI*NIHCLEG-SIRNHKIFKKIPLNYHEVKCM-YLDIKNFSLTGSI 369
WI + LE + N+ + KIP ++ + YLDI N SLTG I
Sbjct: 474 WISKLKKLEVLDLSNNMLSGKIPFWISDLPVLFYLDITNNSLTGDI 519
>06_03_1214 + 28469848-28473048
Length = 1066
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 238 WI*NIHCLEG-SIRNHKIFKKIPLNYHEVKCM-YLDIKNFSLTGSI 369
WI + LE + N+ + +IP ++ + YLDI N SLTG I
Sbjct: 477 WISKLKKLEVLDLSNNMLIGEIPFWIRDMPVLFYLDITNNSLTGDI 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,320,708
Number of Sequences: 37544
Number of extensions: 181244
Number of successful extensions: 382
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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