Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0004_F14
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   3.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   8.1  
AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10 prot...    22   8.1  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 47  GFYCANWRSYRH 82
           GF  +NWRSY H
Sbjct: 285 GFNSSNWRSYIH 296


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 160 GW*AWQIMDLTQMVANSSSPMESNL 234
           GW  +  +D  ++ AN+  P  SN+
Sbjct: 11  GWYGYDSVDRLELAANNVLPSTSNI 35


>AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10
           protein.
          Length = 84

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 108 GRKFEDEFKEELKHTSRGMVSMANNGPNTNGSQF 209
           G  F +   ++     RG     +NGP+TN   F
Sbjct: 35  GETFAELIADQFAKFQRGDRYFYSNGPDTNPGHF 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,670
Number of Sequences: 2352
Number of extensions: 8275
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)